Gene : Eucgr.J02151 E. grandis v2.0

Defline:  (1 of 21) PTHR23070:SF5 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  1820
Name:  ? Eucgr.J02151 Secondary Identifier:  ? PAC:32033696

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02151 0.5kb upstream 0.5kb upstream 2273 true Chr10: 26755692-26757964 Eucalyptus grandis
Eucgr.J02151 0.5kb upstream 0.5kb upstream 500 false Chr10: 26757465-26757964 Eucalyptus grandis
Eucgr.J02151 0.5kb downstream 0.5kb downstream 2273 true Chr10: 26755192-26757464 Eucalyptus grandis
Eucgr.J02151 0.5kb downstream 0.5kb downstream 500 false Chr10: 26755192-26755691 Eucalyptus grandis
Eucgr.J02151 1.0kb upstream 1.0kb upstream 2773 true Chr10: 26755692-26758464 Eucalyptus grandis
Eucgr.J02151 1.0kb upstream 1.0kb upstream 1000 false Chr10: 26757465-26758464 Eucalyptus grandis
Eucgr.J02151 1.0kb downstream 1.0kb downstream 2773 true Chr10: 26754692-26757464 Eucalyptus grandis
Eucgr.J02151 1.0kb downstream 1.0kb downstream 1000 false Chr10: 26754692-26755691 Eucalyptus grandis
Eucgr.J02151 2.0kb upstream 2.0kb upstream 3773 true Chr10: 26755692-26759464 Eucalyptus grandis
Eucgr.J02151 2.0kb upstream 2.0kb upstream 2000 false Chr10: 26757465-26759464 Eucalyptus grandis
Eucgr.J02151 2.0kb downstream 2.0kb downstream 3773 true Chr10: 26753692-26757464 Eucalyptus grandis
Eucgr.J02151 2.0kb downstream 2.0kb downstream 2000 false Chr10: 26753692-26755691 Eucalyptus grandis
Eucgr.J02151 5.0kb upstream 5.0kb upstream 6773 true Chr10: 26755692-26762464 Eucalyptus grandis
Eucgr.J02151 5.0kb upstream 5.0kb upstream 5000 false Chr10: 26757465-26762464 Eucalyptus grandis
Eucgr.J02151 5.0kb downstream 5.0kb downstream 6773 true Chr10: 26750692-26757464 Eucalyptus grandis
Eucgr.J02151 5.0kb downstream 5.0kb downstream 5000 false Chr10: 26750692-26755691 Eucalyptus grandis
Eucgr.J02151 10.0kb upstream 10.0kb upstream 11773 true Chr10: 26755692-26767464 Eucalyptus grandis
Eucgr.J02151 10.0kb upstream 10.0kb upstream 10000 false Chr10: 26757465-26767464 Eucalyptus grandis
Eucgr.J02151 10.0kb downstream 10.0kb downstream 11773 true Chr10: 26745692-26757464 Eucalyptus grandis
Eucgr.J02151 10.0kb downstream 10.0kb downstream 10000 false Chr10: 26745692-26755691 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.268684 0.0 0.915397 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.15843 0.0 5.80861   High
cufflinks 0.137273 0.0 0.517207 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain