Gene : Eucgr.J02066 E. grandis v2.0
Defline:  (1 of 194) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  1743
Name:  ? Eucgr.J02066 Secondary Identifier:  ? PAC:32034405
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02066 0.5kb upstream 0.5kb upstream 2552 true Chr10: 25858920-25861471 Eucalyptus grandis
Eucgr.J02066 0.5kb upstream 0.5kb upstream 500 false Chr10: 25860972-25861471 Eucalyptus grandis
Eucgr.J02066 0.5kb downstream 0.5kb downstream 2552 true Chr10: 25858420-25860971 Eucalyptus grandis
Eucgr.J02066 0.5kb downstream 0.5kb downstream 500 false Chr10: 25858420-25858919 Eucalyptus grandis
Eucgr.J02066 1.0kb upstream 1.0kb upstream 3052 true Chr10: 25858920-25861971 Eucalyptus grandis
Eucgr.J02066 1.0kb upstream 1.0kb upstream 1000 false Chr10: 25860972-25861971 Eucalyptus grandis
Eucgr.J02066 1.0kb downstream 1.0kb downstream 3052 true Chr10: 25857920-25860971 Eucalyptus grandis
Eucgr.J02066 1.0kb downstream 1.0kb downstream 1000 false Chr10: 25857920-25858919 Eucalyptus grandis
Eucgr.J02066 2.0kb upstream 2.0kb upstream 4052 true Chr10: 25858920-25862971 Eucalyptus grandis
Eucgr.J02066 2.0kb upstream 2.0kb upstream 2000 false Chr10: 25860972-25862971 Eucalyptus grandis
Eucgr.J02066 2.0kb downstream 2.0kb downstream 4052 true Chr10: 25856920-25860971 Eucalyptus grandis
Eucgr.J02066 2.0kb downstream 2.0kb downstream 2000 false Chr10: 25856920-25858919 Eucalyptus grandis
Eucgr.J02066 5.0kb upstream 5.0kb upstream 7052 true Chr10: 25858920-25865971 Eucalyptus grandis
Eucgr.J02066 5.0kb upstream 5.0kb upstream 5000 false Chr10: 25860972-25865971 Eucalyptus grandis
Eucgr.J02066 5.0kb downstream 5.0kb downstream 7052 true Chr10: 25853920-25860971 Eucalyptus grandis
Eucgr.J02066 5.0kb downstream 5.0kb downstream 5000 false Chr10: 25853920-25858919 Eucalyptus grandis
Eucgr.J02066 10.0kb upstream 10.0kb upstream 12052 true Chr10: 25858920-25870971 Eucalyptus grandis
Eucgr.J02066 10.0kb upstream 10.0kb upstream 10000 false Chr10: 25860972-25870971 Eucalyptus grandis
Eucgr.J02066 10.0kb downstream 10.0kb downstream 12052 true Chr10: 25848920-25860971 Eucalyptus grandis
Eucgr.J02066 10.0kb downstream 10.0kb downstream 10000 false Chr10: 25848920-25858919 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061661 5270 Rosid View MSA
123747843 5271 Pentapetalae View MSA
122790614 5272 Eudicot View MSA
122044868 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.69046 0.0 5.11971    
cufflinks 3.78576 0.0 10.4105   High
cufflinks 1.30314 0.0 4.06363    
cufflinks 1.20623 0.0 3.77981    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.10794 0.0 3.5632    

0 Strain