Gene : Eucgr.J02849 E. grandis v2.0
Defline:  (1 of 1) KOG0106//KOG0131 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 Genomic Order:  2351
Name:  ? Eucgr.J02849 Secondary Identifier:  ? PAC:32033260
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02849 0.5kb upstream 0.5kb upstream 3573 true Chr10: 33866633-33870205 Eucalyptus grandis
Eucgr.J02849 0.5kb upstream 0.5kb upstream 500 false Chr10: 33866633-33867132 Eucalyptus grandis
Eucgr.J02849 0.5kb downstream 0.5kb downstream 3573 true Chr10: 33867133-33870705 Eucalyptus grandis
Eucgr.J02849 0.5kb downstream 0.5kb downstream 500 false Chr10: 33870206-33870705 Eucalyptus grandis
Eucgr.J02849 1.0kb upstream 1.0kb upstream 4073 true Chr10: 33866133-33870205 Eucalyptus grandis
Eucgr.J02849 1.0kb upstream 1.0kb upstream 1000 false Chr10: 33866133-33867132 Eucalyptus grandis
Eucgr.J02849 1.0kb downstream 1.0kb downstream 4073 true Chr10: 33867133-33871205 Eucalyptus grandis
Eucgr.J02849 1.0kb downstream 1.0kb downstream 1000 false Chr10: 33870206-33871205 Eucalyptus grandis
Eucgr.J02849 2.0kb upstream 2.0kb upstream 5073 true Chr10: 33865133-33870205 Eucalyptus grandis
Eucgr.J02849 2.0kb upstream 2.0kb upstream 2000 false Chr10: 33865133-33867132 Eucalyptus grandis
Eucgr.J02849 2.0kb downstream 2.0kb downstream 5073 true Chr10: 33867133-33872205 Eucalyptus grandis
Eucgr.J02849 2.0kb downstream 2.0kb downstream 2000 false Chr10: 33870206-33872205 Eucalyptus grandis
Eucgr.J02849 5.0kb upstream 5.0kb upstream 8073 true Chr10: 33862133-33870205 Eucalyptus grandis
Eucgr.J02849 5.0kb upstream 5.0kb upstream 5000 false Chr10: 33862133-33867132 Eucalyptus grandis
Eucgr.J02849 5.0kb downstream 5.0kb downstream 8073 true Chr10: 33867133-33875205 Eucalyptus grandis
Eucgr.J02849 5.0kb downstream 5.0kb downstream 5000 false Chr10: 33870206-33875205 Eucalyptus grandis
Eucgr.J02849 10.0kb upstream 10.0kb upstream 13073 true Chr10: 33857133-33870205 Eucalyptus grandis
Eucgr.J02849 10.0kb upstream 10.0kb upstream 10000 false Chr10: 33857133-33867132 Eucalyptus grandis
Eucgr.J02849 10.0kb downstream 10.0kb downstream 13073 true Chr10: 33867133-33880205 Eucalyptus grandis
Eucgr.J02849 10.0kb downstream 10.0kb downstream 10000 false Chr10: 33870206-33880205 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064192 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.322 0.0 36.3136    
cufflinks 6.90754 0.0 16.1515   Low
cufflinks 18.1261 0.0 40.2233   High
cufflinks 7.23466 0.0 16.7818   Low
cufflinks 12.6404 0.0 28.3854    
cufflinks 13.625 0.0 30.471    

0 Strain