Gene : Eucgr.J02562 E. grandis v2.0
Defline:  (1 of 2) PTHR22912//PTHR22912:SF183 - DISULFIDE OXIDOREDUCTASE Genomic Order:  2177
Name:  ? Eucgr.J02562 Secondary Identifier:  ? PAC:32034338
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis THIOREDOX-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02562 0.5kb upstream 0.5kb upstream 4639 true Chr10: 30715990-30720628 Eucalyptus grandis
Eucgr.J02562 0.5kb upstream 0.5kb upstream 500 false Chr10: 30720129-30720628 Eucalyptus grandis
Eucgr.J02562 0.5kb downstream 0.5kb downstream 4639 true Chr10: 30715490-30720128 Eucalyptus grandis
Eucgr.J02562 0.5kb downstream 0.5kb downstream 500 false Chr10: 30715490-30715989 Eucalyptus grandis
Eucgr.J02562 1.0kb upstream 1.0kb upstream 5139 true Chr10: 30715990-30721128 Eucalyptus grandis
Eucgr.J02562 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30720129-30721128 Eucalyptus grandis
Eucgr.J02562 1.0kb downstream 1.0kb downstream 5139 true Chr10: 30714990-30720128 Eucalyptus grandis
Eucgr.J02562 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30714990-30715989 Eucalyptus grandis
Eucgr.J02562 2.0kb upstream 2.0kb upstream 6139 true Chr10: 30715990-30722128 Eucalyptus grandis
Eucgr.J02562 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30720129-30722128 Eucalyptus grandis
Eucgr.J02562 2.0kb downstream 2.0kb downstream 6139 true Chr10: 30713990-30720128 Eucalyptus grandis
Eucgr.J02562 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30713990-30715989 Eucalyptus grandis
Eucgr.J02562 5.0kb upstream 5.0kb upstream 9139 true Chr10: 30715990-30725128 Eucalyptus grandis
Eucgr.J02562 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30720129-30725128 Eucalyptus grandis
Eucgr.J02562 5.0kb downstream 5.0kb downstream 9139 true Chr10: 30710990-30720128 Eucalyptus grandis
Eucgr.J02562 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30710990-30715989 Eucalyptus grandis
Eucgr.J02562 10.0kb upstream 10.0kb upstream 14139 true Chr10: 30715990-30730128 Eucalyptus grandis
Eucgr.J02562 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30720129-30730128 Eucalyptus grandis
Eucgr.J02562 10.0kb downstream 10.0kb downstream 14139 true Chr10: 30705990-30720128 Eucalyptus grandis
Eucgr.J02562 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30705990-30715989 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061396 5270 Rosid View MSA
123746891 5271 Pentapetalae View MSA
122793572 5272 Eudicot View MSA
122044945 5273 Angiosperm View MSA
121345859 5274 Embryophyte View MSA
123424818 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.923983 0.0 2.7343    
cufflinks 0.310223 0.0 1.05943 Low Low
cufflinks 3.64226 0.0 9.39248   High
cufflinks 1.29222 0.0 3.69459    
cufflinks 1.40115 0.0 3.96491    

0 Strain