Gene : Eucgr.J03091 E. grandis v2.0
Defline:  (1 of 25) KOG1947 - Leucine rich repeat proteins, some proteins contain F-box Genomic Order:  2560
Name:  ? Eucgr.J03091 Secondary Identifier:  ? PAC:32033196
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03091 0.5kb upstream 0.5kb upstream 3480 true Chr10: 36385144-36388623 Eucalyptus grandis
Eucgr.J03091 0.5kb upstream 0.5kb upstream 500 false Chr10: 36385144-36385643 Eucalyptus grandis
Eucgr.J03091 0.5kb downstream 0.5kb downstream 3480 true Chr10: 36385644-36389123 Eucalyptus grandis
Eucgr.J03091 0.5kb downstream 0.5kb downstream 500 false Chr10: 36388624-36389123 Eucalyptus grandis
Eucgr.J03091 1.0kb upstream 1.0kb upstream 3980 true Chr10: 36384644-36388623 Eucalyptus grandis
Eucgr.J03091 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36384644-36385643 Eucalyptus grandis
Eucgr.J03091 1.0kb downstream 1.0kb downstream 3980 true Chr10: 36385644-36389623 Eucalyptus grandis
Eucgr.J03091 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36388624-36389623 Eucalyptus grandis
Eucgr.J03091 2.0kb upstream 2.0kb upstream 4980 true Chr10: 36383644-36388623 Eucalyptus grandis
Eucgr.J03091 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36383644-36385643 Eucalyptus grandis
Eucgr.J03091 2.0kb downstream 2.0kb downstream 4980 true Chr10: 36385644-36390623 Eucalyptus grandis
Eucgr.J03091 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36388624-36390623 Eucalyptus grandis
Eucgr.J03091 5.0kb upstream 5.0kb upstream 7980 true Chr10: 36380644-36388623 Eucalyptus grandis
Eucgr.J03091 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36380644-36385643 Eucalyptus grandis
Eucgr.J03091 5.0kb downstream 5.0kb downstream 7980 true Chr10: 36385644-36393623 Eucalyptus grandis
Eucgr.J03091 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36388624-36393623 Eucalyptus grandis
Eucgr.J03091 10.0kb upstream 10.0kb upstream 12980 true Chr10: 36375644-36388623 Eucalyptus grandis
Eucgr.J03091 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36375644-36385643 Eucalyptus grandis
Eucgr.J03091 10.0kb downstream 10.0kb downstream 12980 true Chr10: 36385644-36398623 Eucalyptus grandis
Eucgr.J03091 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36388624-36398623 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064458 5270 Rosid View MSA
123737042 5271 Pentapetalae View MSA
122791043 5272 Eudicot View MSA
122044000 5273 Angiosperm View MSA
121347064 5274 Embryophyte View MSA
123380487 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5094 0.0 24.2464    
cufflinks 6.20939 0.0 14.8749    
cufflinks 10.3519 0.0 23.8294    
cufflinks 5.36996 0.0 13.0462    
cufflinks 4.749 0.0 11.7411   Low
cufflinks 12.935 0.0 29.542   High

0 Strain