Gene : Eucgr.J03059 E. grandis v2.0
Defline:  (1 of 1) PTHR13208 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4 Genomic Order:  2529
Name:  ? Eucgr.J03059 Secondary Identifier:  ? PAC:32035032
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03059 0.5kb upstream 0.5kb upstream 1919 true Chr10: 36110099-36112017 Eucalyptus grandis
Eucgr.J03059 0.5kb upstream 0.5kb upstream 500 false Chr10: 36110099-36110598 Eucalyptus grandis
Eucgr.J03059 0.5kb downstream 0.5kb downstream 1919 true Chr10: 36110599-36112517 Eucalyptus grandis
Eucgr.J03059 0.5kb downstream 0.5kb downstream 500 false Chr10: 36112018-36112517 Eucalyptus grandis
Eucgr.J03059 1.0kb upstream 1.0kb upstream 2419 true Chr10: 36109599-36112017 Eucalyptus grandis
Eucgr.J03059 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36109599-36110598 Eucalyptus grandis
Eucgr.J03059 1.0kb downstream 1.0kb downstream 2419 true Chr10: 36110599-36113017 Eucalyptus grandis
Eucgr.J03059 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36112018-36113017 Eucalyptus grandis
Eucgr.J03059 2.0kb upstream 2.0kb upstream 3419 true Chr10: 36108599-36112017 Eucalyptus grandis
Eucgr.J03059 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36108599-36110598 Eucalyptus grandis
Eucgr.J03059 2.0kb downstream 2.0kb downstream 3419 true Chr10: 36110599-36114017 Eucalyptus grandis
Eucgr.J03059 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36112018-36114017 Eucalyptus grandis
Eucgr.J03059 5.0kb upstream 5.0kb upstream 6419 true Chr10: 36105599-36112017 Eucalyptus grandis
Eucgr.J03059 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36105599-36110598 Eucalyptus grandis
Eucgr.J03059 5.0kb downstream 5.0kb downstream 6419 true Chr10: 36110599-36117017 Eucalyptus grandis
Eucgr.J03059 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36112018-36117017 Eucalyptus grandis
Eucgr.J03059 10.0kb upstream 10.0kb upstream 11419 true Chr10: 36100599-36112017 Eucalyptus grandis
Eucgr.J03059 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36100599-36110598 Eucalyptus grandis
Eucgr.J03059 10.0kb downstream 10.0kb downstream 11419 true Chr10: 36110599-36122017 Eucalyptus grandis
Eucgr.J03059 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36112018-36122017 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063104 5270 Rosid View MSA
123737443 5271 Pentapetalae View MSA
122786979 5272 Eudicot View MSA
122042269 5273 Angiosperm View MSA
121345208 5274 Embryophyte View MSA
123380175 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9684 0.0 28.4671    
cufflinks 3.12871 0.0 8.60368   Low
cufflinks 9.46635 0.0 23.3333    
cufflinks 8.33584 0.0 20.9655    
cufflinks 4.63309 0.0 12.2095    
cufflinks 10.0666 0.0 24.1051    

0 Strain