Gene : Eucgr.J03037 E. grandis v2.0
Defline:  (1 of 2) 4.1.99.13 - (6-4)DNA photolyase / DNA photolyase Genomic Order:  2508
Name:  ? Eucgr.J03037 Secondary Identifier:  ? PAC:32033982
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03037 0.5kb upstream 0.5kb upstream 5565 true Chr10: 35942433-35947997 Eucalyptus grandis
Eucgr.J03037 0.5kb upstream 0.5kb upstream 500 false Chr10: 35942433-35942932 Eucalyptus grandis
Eucgr.J03037 0.5kb downstream 0.5kb downstream 5565 true Chr10: 35942933-35948497 Eucalyptus grandis
Eucgr.J03037 0.5kb downstream 0.5kb downstream 500 false Chr10: 35947998-35948497 Eucalyptus grandis
Eucgr.J03037 1.0kb upstream 1.0kb upstream 6065 true Chr10: 35941933-35947997 Eucalyptus grandis
Eucgr.J03037 1.0kb upstream 1.0kb upstream 1000 false Chr10: 35941933-35942932 Eucalyptus grandis
Eucgr.J03037 1.0kb downstream 1.0kb downstream 6065 true Chr10: 35942933-35948997 Eucalyptus grandis
Eucgr.J03037 1.0kb downstream 1.0kb downstream 1000 false Chr10: 35947998-35948997 Eucalyptus grandis
Eucgr.J03037 2.0kb upstream 2.0kb upstream 7065 true Chr10: 35940933-35947997 Eucalyptus grandis
Eucgr.J03037 2.0kb upstream 2.0kb upstream 2000 false Chr10: 35940933-35942932 Eucalyptus grandis
Eucgr.J03037 2.0kb downstream 2.0kb downstream 7065 true Chr10: 35942933-35949997 Eucalyptus grandis
Eucgr.J03037 2.0kb downstream 2.0kb downstream 2000 false Chr10: 35947998-35949997 Eucalyptus grandis
Eucgr.J03037 5.0kb upstream 5.0kb upstream 10065 true Chr10: 35937933-35947997 Eucalyptus grandis
Eucgr.J03037 5.0kb upstream 5.0kb upstream 5000 false Chr10: 35937933-35942932 Eucalyptus grandis
Eucgr.J03037 5.0kb downstream 5.0kb downstream 10065 true Chr10: 35942933-35952997 Eucalyptus grandis
Eucgr.J03037 5.0kb downstream 5.0kb downstream 5000 false Chr10: 35947998-35952997 Eucalyptus grandis
Eucgr.J03037 10.0kb upstream 10.0kb upstream 15065 true Chr10: 35932933-35947997 Eucalyptus grandis
Eucgr.J03037 10.0kb upstream 10.0kb upstream 10000 false Chr10: 35932933-35942932 Eucalyptus grandis
Eucgr.J03037 10.0kb downstream 10.0kb downstream 15065 true Chr10: 35942933-35957997 Eucalyptus grandis
Eucgr.J03037 10.0kb downstream 10.0kb downstream 10000 false Chr10: 35947998-35957997 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062043 5270 Rosid View MSA
123737581 5271 Pentapetalae View MSA
122791265 5272 Eudicot View MSA
122046460 5273 Angiosperm View MSA
121346822 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.97216 0.0 14.0675   High
cufflinks 0.894194 0.0 2.53248    
cufflinks 3.03274 0.0 7.62194    
cufflinks 0.815984 0.0 2.32986   Low
cufflinks 3.54162 0.0 8.75793    
cufflinks 1.25375 0.0 3.44492    

0 Strain