Gene : Eucgr.J03032 E. grandis v2.0
Defline:  (1 of 1) PTHR10992:SF898 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  2504
Name:  ? Eucgr.J03032 Secondary Identifier:  ? PAC:32032435
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPAS-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03032 0.5kb upstream 0.5kb upstream 6042 true Chr10: 35918929-35924970 Eucalyptus grandis
Eucgr.J03032 0.5kb upstream 0.5kb upstream 500 false Chr10: 35918929-35919428 Eucalyptus grandis
Eucgr.J03032 0.5kb downstream 0.5kb downstream 6042 true Chr10: 35919429-35925470 Eucalyptus grandis
Eucgr.J03032 0.5kb downstream 0.5kb downstream 500 false Chr10: 35924971-35925470 Eucalyptus grandis
Eucgr.J03032 1.0kb upstream 1.0kb upstream 6542 true Chr10: 35918429-35924970 Eucalyptus grandis
Eucgr.J03032 1.0kb upstream 1.0kb upstream 1000 false Chr10: 35918429-35919428 Eucalyptus grandis
Eucgr.J03032 1.0kb downstream 1.0kb downstream 6542 true Chr10: 35919429-35925970 Eucalyptus grandis
Eucgr.J03032 1.0kb downstream 1.0kb downstream 1000 false Chr10: 35924971-35925970 Eucalyptus grandis
Eucgr.J03032 2.0kb upstream 2.0kb upstream 7542 true Chr10: 35917429-35924970 Eucalyptus grandis
Eucgr.J03032 2.0kb upstream 2.0kb upstream 2000 false Chr10: 35917429-35919428 Eucalyptus grandis
Eucgr.J03032 2.0kb downstream 2.0kb downstream 7542 true Chr10: 35919429-35926970 Eucalyptus grandis
Eucgr.J03032 2.0kb downstream 2.0kb downstream 2000 false Chr10: 35924971-35926970 Eucalyptus grandis
Eucgr.J03032 5.0kb upstream 5.0kb upstream 10542 true Chr10: 35914429-35924970 Eucalyptus grandis
Eucgr.J03032 5.0kb upstream 5.0kb upstream 5000 false Chr10: 35914429-35919428 Eucalyptus grandis
Eucgr.J03032 5.0kb downstream 5.0kb downstream 10542 true Chr10: 35919429-35929970 Eucalyptus grandis
Eucgr.J03032 5.0kb downstream 5.0kb downstream 5000 false Chr10: 35924971-35929970 Eucalyptus grandis
Eucgr.J03032 10.0kb upstream 10.0kb upstream 15542 true Chr10: 35909429-35924970 Eucalyptus grandis
Eucgr.J03032 10.0kb upstream 10.0kb upstream 10000 false Chr10: 35909429-35919428 Eucalyptus grandis
Eucgr.J03032 10.0kb downstream 10.0kb downstream 15542 true Chr10: 35919429-35934970 Eucalyptus grandis
Eucgr.J03032 10.0kb downstream 10.0kb downstream 10000 false Chr10: 35924971-35934970 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065510 5270 Rosid View MSA
123753600 5271 Pentapetalae View MSA
122789724 5272 Eudicot View MSA
122045199 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121343939 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.11249 0.0 18.5329    
cufflinks 24.7496 0.0 54.7709   High
cufflinks 6.76119 0.0 15.6434   Low
cufflinks 21.1314 0.0 46.7306   High
cufflinks 13.7464 0.0 30.6013    
cufflinks 9.13848 0.0 20.7104    

0 Strain