Gene : Eucgr.K00402 E. grandis v2.0
Defline:  (1 of 1) PTHR14136:SF11 - THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC Genomic Order:  315
Name:  ? Eucgr.K00402 Secondary Identifier:  ? PAC:32068323
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00402 0.5kb upstream 0.5kb upstream 3575 true Chr11: 3616465-3620039 Eucalyptus grandis
Eucgr.K00402 0.5kb upstream 0.5kb upstream 500 false Chr11: 3619540-3620039 Eucalyptus grandis
Eucgr.K00402 0.5kb downstream 0.5kb downstream 3575 true Chr11: 3615965-3619539 Eucalyptus grandis
Eucgr.K00402 0.5kb downstream 0.5kb downstream 500 false Chr11: 3615965-3616464 Eucalyptus grandis
Eucgr.K00402 1.0kb upstream 1.0kb upstream 4075 true Chr11: 3616465-3620539 Eucalyptus grandis
Eucgr.K00402 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3619540-3620539 Eucalyptus grandis
Eucgr.K00402 1.0kb downstream 1.0kb downstream 4075 true Chr11: 3615465-3619539 Eucalyptus grandis
Eucgr.K00402 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3615465-3616464 Eucalyptus grandis
Eucgr.K00402 2.0kb upstream 2.0kb upstream 5075 true Chr11: 3616465-3621539 Eucalyptus grandis
Eucgr.K00402 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3619540-3621539 Eucalyptus grandis
Eucgr.K00402 2.0kb downstream 2.0kb downstream 5075 true Chr11: 3614465-3619539 Eucalyptus grandis
Eucgr.K00402 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3614465-3616464 Eucalyptus grandis
Eucgr.K00402 5.0kb upstream 5.0kb upstream 8075 true Chr11: 3616465-3624539 Eucalyptus grandis
Eucgr.K00402 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3619540-3624539 Eucalyptus grandis
Eucgr.K00402 5.0kb downstream 5.0kb downstream 8075 true Chr11: 3611465-3619539 Eucalyptus grandis
Eucgr.K00402 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3611465-3616464 Eucalyptus grandis
Eucgr.K00402 10.0kb upstream 10.0kb upstream 13075 true Chr11: 3616465-3629539 Eucalyptus grandis
Eucgr.K00402 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3619540-3629539 Eucalyptus grandis
Eucgr.K00402 10.0kb downstream 10.0kb downstream 13075 true Chr11: 3606465-3619539 Eucalyptus grandis
Eucgr.K00402 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3606465-3616464 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066927 5270 Rosid View MSA
123751077 5271 Pentapetalae View MSA
122794954 5272 Eudicot View MSA
122044610 5273 Angiosperm View MSA
121348286 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.0071 0.0 55.9738    
cufflinks 5.40418 0.0 17.999    
cufflinks 12.4314 0.0 33.6142    
cufflinks 3.92944 0.0 10.9627    
cufflinks 4.93846 0.0 13.6821    
cufflinks 51.4906 0.0 138.732 High High

0 Strain