Gene : Eucgr.K00377 E. grandis v2.0
Defline:  (1 of 8) PTHR23056:SF45 - CALCINEURIN B-LIKE PROTEIN 4 Genomic Order:  292
Name:  ? Eucgr.K00377 Secondary Identifier:  ? PAC:32067918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00377 0.5kb upstream 0.5kb upstream 2554 true Chr11: 3416401-3418954 Eucalyptus grandis
Eucgr.K00377 0.5kb upstream 0.5kb upstream 500 false Chr11: 3418455-3418954 Eucalyptus grandis
Eucgr.K00377 0.5kb downstream 0.5kb downstream 2554 true Chr11: 3415901-3418454 Eucalyptus grandis
Eucgr.K00377 0.5kb downstream 0.5kb downstream 500 false Chr11: 3415901-3416400 Eucalyptus grandis
Eucgr.K00377 1.0kb upstream 1.0kb upstream 3054 true Chr11: 3416401-3419454 Eucalyptus grandis
Eucgr.K00377 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3418455-3419454 Eucalyptus grandis
Eucgr.K00377 1.0kb downstream 1.0kb downstream 3054 true Chr11: 3415401-3418454 Eucalyptus grandis
Eucgr.K00377 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3415401-3416400 Eucalyptus grandis
Eucgr.K00377 2.0kb upstream 2.0kb upstream 4054 true Chr11: 3416401-3420454 Eucalyptus grandis
Eucgr.K00377 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3418455-3420454 Eucalyptus grandis
Eucgr.K00377 2.0kb downstream 2.0kb downstream 4054 true Chr11: 3414401-3418454 Eucalyptus grandis
Eucgr.K00377 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3414401-3416400 Eucalyptus grandis
Eucgr.K00377 5.0kb upstream 5.0kb upstream 7054 true Chr11: 3416401-3423454 Eucalyptus grandis
Eucgr.K00377 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3418455-3423454 Eucalyptus grandis
Eucgr.K00377 5.0kb downstream 5.0kb downstream 7054 true Chr11: 3411401-3418454 Eucalyptus grandis
Eucgr.K00377 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3411401-3416400 Eucalyptus grandis
Eucgr.K00377 10.0kb upstream 10.0kb upstream 12054 true Chr11: 3416401-3428454 Eucalyptus grandis
Eucgr.K00377 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3418455-3428454 Eucalyptus grandis
Eucgr.K00377 10.0kb downstream 10.0kb downstream 12054 true Chr11: 3406401-3418454 Eucalyptus grandis
Eucgr.K00377 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3406401-3416400 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065494 5270 Rosid View MSA
123741791 5271 Pentapetalae View MSA
122789949 5272 Eudicot View MSA
122051597 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350709 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.684785 0.0 2.33304    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.14965 0.0 3.64594    
cufflinks 0.606794 0.0 2.08358    
cufflinks 2.10604 0.0 6.21291   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain