Gene : Eucgr.K00238 E. grandis v2.0
Defline:  (1 of 3) PTHR10015:SF168 - HEAT STRESS TRANSCRIPTION FACTOR B-2A Genomic Order:  174
Name:  ? Eucgr.K00238 Secondary Identifier:  ? PAC:32066888
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00238 0.5kb upstream 0.5kb upstream 2159 true Chr11: 1946274-1948432 Eucalyptus grandis
Eucgr.K00238 0.5kb upstream 0.5kb upstream 500 false Chr11: 1947933-1948432 Eucalyptus grandis
Eucgr.K00238 0.5kb downstream 0.5kb downstream 2159 true Chr11: 1945774-1947932 Eucalyptus grandis
Eucgr.K00238 0.5kb downstream 0.5kb downstream 500 false Chr11: 1945774-1946273 Eucalyptus grandis
Eucgr.K00238 1.0kb upstream 1.0kb upstream 2659 true Chr11: 1946274-1948932 Eucalyptus grandis
Eucgr.K00238 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1947933-1948932 Eucalyptus grandis
Eucgr.K00238 1.0kb downstream 1.0kb downstream 2659 true Chr11: 1945274-1947932 Eucalyptus grandis
Eucgr.K00238 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1945274-1946273 Eucalyptus grandis
Eucgr.K00238 2.0kb upstream 2.0kb upstream 3659 true Chr11: 1946274-1949932 Eucalyptus grandis
Eucgr.K00238 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1947933-1949932 Eucalyptus grandis
Eucgr.K00238 2.0kb downstream 2.0kb downstream 3659 true Chr11: 1944274-1947932 Eucalyptus grandis
Eucgr.K00238 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1944274-1946273 Eucalyptus grandis
Eucgr.K00238 5.0kb upstream 5.0kb upstream 6659 true Chr11: 1946274-1952932 Eucalyptus grandis
Eucgr.K00238 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1947933-1952932 Eucalyptus grandis
Eucgr.K00238 5.0kb downstream 5.0kb downstream 6659 true Chr11: 1941274-1947932 Eucalyptus grandis
Eucgr.K00238 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1941274-1946273 Eucalyptus grandis
Eucgr.K00238 10.0kb upstream 10.0kb upstream 11659 true Chr11: 1946274-1957932 Eucalyptus grandis
Eucgr.K00238 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1947933-1957932 Eucalyptus grandis
Eucgr.K00238 10.0kb downstream 10.0kb downstream 11659 true Chr11: 1936274-1947932 Eucalyptus grandis
Eucgr.K00238 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1936274-1946273 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071788 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.75297 0.0 7.25005   Low
cufflinks 27.4683 0.0 60.9863   High
cufflinks 8.99893 0.0 21.2818    
cufflinks 7.31402 0.0 17.6586    
cufflinks 12.9607 0.0 29.7587    
cufflinks 7.04865 0.0 16.6945    

0 Strain