Gene : Eucgr.K00176 E. grandis v2.0
Defline:  (1 of 1) 2.3.1.47 - 8-amino-7-oxononanoate synthase / AONS Genomic Order:  117
Name:  ? Eucgr.K00176 Secondary Identifier:  ? PAC:32068387
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00176 0.5kb upstream 0.5kb upstream 5435 true Chr11: 1148146-1153580 Eucalyptus grandis
Eucgr.K00176 0.5kb upstream 0.5kb upstream 500 false Chr11: 1148146-1148645 Eucalyptus grandis
Eucgr.K00176 0.5kb downstream 0.5kb downstream 5435 true Chr11: 1148646-1154080 Eucalyptus grandis
Eucgr.K00176 0.5kb downstream 0.5kb downstream 500 false Chr11: 1153581-1154080 Eucalyptus grandis
Eucgr.K00176 1.0kb upstream 1.0kb upstream 5935 true Chr11: 1147646-1153580 Eucalyptus grandis
Eucgr.K00176 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1147646-1148645 Eucalyptus grandis
Eucgr.K00176 1.0kb downstream 1.0kb downstream 5935 true Chr11: 1148646-1154580 Eucalyptus grandis
Eucgr.K00176 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1153581-1154580 Eucalyptus grandis
Eucgr.K00176 2.0kb upstream 2.0kb upstream 6935 true Chr11: 1146646-1153580 Eucalyptus grandis
Eucgr.K00176 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1146646-1148645 Eucalyptus grandis
Eucgr.K00176 2.0kb downstream 2.0kb downstream 6935 true Chr11: 1148646-1155580 Eucalyptus grandis
Eucgr.K00176 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1153581-1155580 Eucalyptus grandis
Eucgr.K00176 5.0kb upstream 5.0kb upstream 9935 true Chr11: 1143646-1153580 Eucalyptus grandis
Eucgr.K00176 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1143646-1148645 Eucalyptus grandis
Eucgr.K00176 5.0kb downstream 5.0kb downstream 9935 true Chr11: 1148646-1158580 Eucalyptus grandis
Eucgr.K00176 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1153581-1158580 Eucalyptus grandis
Eucgr.K00176 10.0kb upstream 10.0kb upstream 14935 true Chr11: 1138646-1153580 Eucalyptus grandis
Eucgr.K00176 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1138646-1148645 Eucalyptus grandis
Eucgr.K00176 10.0kb downstream 10.0kb downstream 14935 true Chr11: 1148646-1163580 Eucalyptus grandis
Eucgr.K00176 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1153581-1163580 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063133 5270 Rosid View MSA
123736926 5271 Pentapetalae View MSA
122789406 5272 Eudicot View MSA
122047915 5273 Angiosperm View MSA
121344839 5274 Embryophyte View MSA
123424472 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.25 0.0 14.8401   High
cufflinks 2.42401 0.0 6.31076    
cufflinks 4.39237 0.0 10.7837    
cufflinks 2.11361 0.0 5.56986    
cufflinks 1.22496 0.0 3.42174   Low
cufflinks 6.08803 0.0 14.4954    

0 Strain