Gene : Eucgr.K00106 E. grandis v2.0
Defline:  (1 of 1) PTHR31791:SF8 - ZIP4-LIKE PROTEIN Genomic Order:  50
Name:  ? Eucgr.K00106 Secondary Identifier:  ? PAC:32068170
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00106 0.5kb upstream 0.5kb upstream 4167 true Chr11: 672171-676337 Eucalyptus grandis
Eucgr.K00106 0.5kb upstream 0.5kb upstream 500 false Chr11: 675838-676337 Eucalyptus grandis
Eucgr.K00106 0.5kb downstream 0.5kb downstream 4167 true Chr11: 671671-675837 Eucalyptus grandis
Eucgr.K00106 0.5kb downstream 0.5kb downstream 500 false Chr11: 671671-672170 Eucalyptus grandis
Eucgr.K00106 1.0kb upstream 1.0kb upstream 4667 true Chr11: 672171-676837 Eucalyptus grandis
Eucgr.K00106 1.0kb upstream 1.0kb upstream 1000 false Chr11: 675838-676837 Eucalyptus grandis
Eucgr.K00106 1.0kb downstream 1.0kb downstream 4667 true Chr11: 671171-675837 Eucalyptus grandis
Eucgr.K00106 1.0kb downstream 1.0kb downstream 1000 false Chr11: 671171-672170 Eucalyptus grandis
Eucgr.K00106 2.0kb upstream 2.0kb upstream 5667 true Chr11: 672171-677837 Eucalyptus grandis
Eucgr.K00106 2.0kb upstream 2.0kb upstream 2000 false Chr11: 675838-677837 Eucalyptus grandis
Eucgr.K00106 2.0kb downstream 2.0kb downstream 5667 true Chr11: 670171-675837 Eucalyptus grandis
Eucgr.K00106 2.0kb downstream 2.0kb downstream 2000 false Chr11: 670171-672170 Eucalyptus grandis
Eucgr.K00106 5.0kb upstream 5.0kb upstream 8667 true Chr11: 672171-680837 Eucalyptus grandis
Eucgr.K00106 5.0kb upstream 5.0kb upstream 5000 false Chr11: 675838-680837 Eucalyptus grandis
Eucgr.K00106 5.0kb downstream 5.0kb downstream 8667 true Chr11: 667171-675837 Eucalyptus grandis
Eucgr.K00106 5.0kb downstream 5.0kb downstream 5000 false Chr11: 667171-672170 Eucalyptus grandis
Eucgr.K00106 10.0kb upstream 10.0kb upstream 13667 true Chr11: 672171-685837 Eucalyptus grandis
Eucgr.K00106 10.0kb upstream 10.0kb upstream 10000 false Chr11: 675838-685837 Eucalyptus grandis
Eucgr.K00106 10.0kb downstream 10.0kb downstream 13667 true Chr11: 662171-675837 Eucalyptus grandis
Eucgr.K00106 10.0kb downstream 10.0kb downstream 10000 false Chr11: 662171-672170 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064212 5270 Rosid View MSA
123738151 5271 Pentapetalae View MSA
122793874 5272 Eudicot View MSA
122044011 5273 Angiosperm View MSA
121345716 5274 Embryophyte View MSA
123425188 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.232133 0.0 0.749242 Low  
cufflinks 1.14945 0.0 3.09168   High
cufflinks 0.227519 0.0 0.736175 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain