Gene : Eucgr.K00068 E. grandis v2.0
Defline:  (1 of 1) PTHR10108:SF708 - TOCOPHEROL O-METHYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  12
Name:  ? Eucgr.K00068 Secondary Identifier:  ? PAC:32067895
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1422 Eucalyptus grandis pathologic  
Egrandis PWY-7436 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00068 0.5kb upstream 0.5kb upstream 3056 true Chr11: 429600-432655 Eucalyptus grandis
Eucgr.K00068 0.5kb upstream 0.5kb upstream 500 false Chr11: 429600-430099 Eucalyptus grandis
Eucgr.K00068 0.5kb downstream 0.5kb downstream 3056 true Chr11: 430100-433155 Eucalyptus grandis
Eucgr.K00068 0.5kb downstream 0.5kb downstream 500 false Chr11: 432656-433155 Eucalyptus grandis
Eucgr.K00068 1.0kb upstream 1.0kb upstream 3556 true Chr11: 429100-432655 Eucalyptus grandis
Eucgr.K00068 1.0kb upstream 1.0kb upstream 1000 false Chr11: 429100-430099 Eucalyptus grandis
Eucgr.K00068 1.0kb downstream 1.0kb downstream 3556 true Chr11: 430100-433655 Eucalyptus grandis
Eucgr.K00068 1.0kb downstream 1.0kb downstream 1000 false Chr11: 432656-433655 Eucalyptus grandis
Eucgr.K00068 2.0kb upstream 2.0kb upstream 4556 true Chr11: 428100-432655 Eucalyptus grandis
Eucgr.K00068 2.0kb upstream 2.0kb upstream 2000 false Chr11: 428100-430099 Eucalyptus grandis
Eucgr.K00068 2.0kb downstream 2.0kb downstream 4556 true Chr11: 430100-434655 Eucalyptus grandis
Eucgr.K00068 2.0kb downstream 2.0kb downstream 2000 false Chr11: 432656-434655 Eucalyptus grandis
Eucgr.K00068 5.0kb upstream 5.0kb upstream 7556 true Chr11: 425100-432655 Eucalyptus grandis
Eucgr.K00068 5.0kb upstream 5.0kb upstream 5000 false Chr11: 425100-430099 Eucalyptus grandis
Eucgr.K00068 5.0kb downstream 5.0kb downstream 7556 true Chr11: 430100-437655 Eucalyptus grandis
Eucgr.K00068 5.0kb downstream 5.0kb downstream 5000 false Chr11: 432656-437655 Eucalyptus grandis
Eucgr.K00068 10.0kb upstream 10.0kb upstream 12556 true Chr11: 420100-432655 Eucalyptus grandis
Eucgr.K00068 10.0kb upstream 10.0kb upstream 10000 false Chr11: 420100-430099 Eucalyptus grandis
Eucgr.K00068 10.0kb downstream 10.0kb downstream 12556 true Chr11: 430100-442655 Eucalyptus grandis
Eucgr.K00068 10.0kb downstream 10.0kb downstream 10000 false Chr11: 432656-442655 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.0387 0.0 72.0278 High High
cufflinks 5.65025 0.0 14.4341   Low
cufflinks 15.0245 0.0 39.5605    
cufflinks 6.42744 0.0 16.0369    
cufflinks 7.10444 0.0 17.3949    
cufflinks 33.4624 0.0 75.3301   High

0 Strain