Gene : Eucgr.K00073 E. grandis v2.0
Defline:  (1 of 1) PF08378 - Nuclease-related domain (NERD) Genomic Order:  17
Name:  ? Eucgr.K00073 Secondary Identifier:  ? PAC:32066892
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00073 0.5kb upstream 0.5kb upstream 5242 true Chr11: 467189-472430 Eucalyptus grandis
Eucgr.K00073 0.5kb upstream 0.5kb upstream 500 false Chr11: 467189-467688 Eucalyptus grandis
Eucgr.K00073 0.5kb downstream 0.5kb downstream 5242 true Chr11: 467689-472930 Eucalyptus grandis
Eucgr.K00073 0.5kb downstream 0.5kb downstream 500 false Chr11: 472431-472930 Eucalyptus grandis
Eucgr.K00073 1.0kb upstream 1.0kb upstream 5742 true Chr11: 466689-472430 Eucalyptus grandis
Eucgr.K00073 1.0kb upstream 1.0kb upstream 1000 false Chr11: 466689-467688 Eucalyptus grandis
Eucgr.K00073 1.0kb downstream 1.0kb downstream 5742 true Chr11: 467689-473430 Eucalyptus grandis
Eucgr.K00073 1.0kb downstream 1.0kb downstream 1000 false Chr11: 472431-473430 Eucalyptus grandis
Eucgr.K00073 2.0kb upstream 2.0kb upstream 6742 true Chr11: 465689-472430 Eucalyptus grandis
Eucgr.K00073 2.0kb upstream 2.0kb upstream 2000 false Chr11: 465689-467688 Eucalyptus grandis
Eucgr.K00073 2.0kb downstream 2.0kb downstream 6742 true Chr11: 467689-474430 Eucalyptus grandis
Eucgr.K00073 2.0kb downstream 2.0kb downstream 2000 false Chr11: 472431-474430 Eucalyptus grandis
Eucgr.K00073 5.0kb upstream 5.0kb upstream 9742 true Chr11: 462689-472430 Eucalyptus grandis
Eucgr.K00073 5.0kb upstream 5.0kb upstream 5000 false Chr11: 462689-467688 Eucalyptus grandis
Eucgr.K00073 5.0kb downstream 5.0kb downstream 9742 true Chr11: 467689-477430 Eucalyptus grandis
Eucgr.K00073 5.0kb downstream 5.0kb downstream 5000 false Chr11: 472431-477430 Eucalyptus grandis
Eucgr.K00073 10.0kb upstream 10.0kb upstream 14742 true Chr11: 457689-472430 Eucalyptus grandis
Eucgr.K00073 10.0kb upstream 10.0kb upstream 10000 false Chr11: 457689-467688 Eucalyptus grandis
Eucgr.K00073 10.0kb downstream 10.0kb downstream 14742 true Chr11: 467689-482430 Eucalyptus grandis
Eucgr.K00073 10.0kb downstream 10.0kb downstream 10000 false Chr11: 472431-482430 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041014 5273 Angiosperm View MSA
124065575 5270 Rosid View MSA
123737845 5271 Pentapetalae View MSA
122786817 5272 Eudicot View MSA
121347889 5274 Embryophyte View MSA
123380667 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.4104 0.0 103.009 High High
cufflinks 24.7493 0.0 55.7972    
cufflinks 28.584 0.0 64.268 High  
cufflinks 22.5677 0.0 51.5299   Low
cufflinks 33.5497 0.0 75.5148    
cufflinks 25.8173 0.0 58.4124    

0 Strain