Gene : Eucgr.K00737 E. grandis v2.0
Defline:  (1 of 1) PTHR22847:SF451 - E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Genomic Order:  619
Name:  ? Eucgr.K00737 Secondary Identifier:  ? PAC:32068148
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00737 0.5kb upstream 0.5kb upstream 7812 true Chr11: 8778761-8786572 Eucalyptus grandis
Eucgr.K00737 0.5kb upstream 0.5kb upstream 500 false Chr11: 8778761-8779260 Eucalyptus grandis
Eucgr.K00737 0.5kb downstream 0.5kb downstream 7812 true Chr11: 8779261-8787072 Eucalyptus grandis
Eucgr.K00737 0.5kb downstream 0.5kb downstream 500 false Chr11: 8786573-8787072 Eucalyptus grandis
Eucgr.K00737 1.0kb upstream 1.0kb upstream 8312 true Chr11: 8778261-8786572 Eucalyptus grandis
Eucgr.K00737 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8778261-8779260 Eucalyptus grandis
Eucgr.K00737 1.0kb downstream 1.0kb downstream 8312 true Chr11: 8779261-8787572 Eucalyptus grandis
Eucgr.K00737 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8786573-8787572 Eucalyptus grandis
Eucgr.K00737 2.0kb upstream 2.0kb upstream 9312 true Chr11: 8777261-8786572 Eucalyptus grandis
Eucgr.K00737 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8777261-8779260 Eucalyptus grandis
Eucgr.K00737 2.0kb downstream 2.0kb downstream 9312 true Chr11: 8779261-8788572 Eucalyptus grandis
Eucgr.K00737 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8786573-8788572 Eucalyptus grandis
Eucgr.K00737 5.0kb upstream 5.0kb upstream 12312 true Chr11: 8774261-8786572 Eucalyptus grandis
Eucgr.K00737 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8774261-8779260 Eucalyptus grandis
Eucgr.K00737 5.0kb downstream 5.0kb downstream 12312 true Chr11: 8779261-8791572 Eucalyptus grandis
Eucgr.K00737 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8786573-8791572 Eucalyptus grandis
Eucgr.K00737 10.0kb upstream 10.0kb upstream 17312 true Chr11: 8769261-8786572 Eucalyptus grandis
Eucgr.K00737 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8769261-8779260 Eucalyptus grandis
Eucgr.K00737 10.0kb downstream 10.0kb downstream 17312 true Chr11: 8779261-8796572 Eucalyptus grandis
Eucgr.K00737 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8786573-8796572 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074253 5270 Rosid View MSA
123741862 5271 Pentapetalae View MSA
122790393 5272 Eudicot View MSA
122044386 5273 Angiosperm View MSA
121345400 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.07538 0.0 9.50848    
cufflinks 3.57038 0.0 8.64935    
cufflinks 5.06073 0.0 11.8366    
cufflinks 3.25377 0.0 8.00232    
cufflinks 3.90856 0.0 9.34406    
cufflinks 8.14886 0.0 19.2393   High

0 Strain