Gene : Eucgr.K00590 E. grandis v2.0
Defline:  (1 of 1) PTHR10969:SF25 - AUTOPHAGY-RELATED PROTEIN 8I Genomic Order:  505
Name:  ? Eucgr.K00590 Secondary Identifier:  ? PAC:32068714
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00590 0.5kb upstream 0.5kb upstream 2425 true Chr11: 6641989-6644413 Eucalyptus grandis
Eucgr.K00590 0.5kb upstream 0.5kb upstream 500 false Chr11: 6641989-6642488 Eucalyptus grandis
Eucgr.K00590 0.5kb downstream 0.5kb downstream 2425 true Chr11: 6642489-6644913 Eucalyptus grandis
Eucgr.K00590 0.5kb downstream 0.5kb downstream 500 false Chr11: 6644414-6644913 Eucalyptus grandis
Eucgr.K00590 1.0kb upstream 1.0kb upstream 2925 true Chr11: 6641489-6644413 Eucalyptus grandis
Eucgr.K00590 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6641489-6642488 Eucalyptus grandis
Eucgr.K00590 1.0kb downstream 1.0kb downstream 2925 true Chr11: 6642489-6645413 Eucalyptus grandis
Eucgr.K00590 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6644414-6645413 Eucalyptus grandis
Eucgr.K00590 2.0kb upstream 2.0kb upstream 3925 true Chr11: 6640489-6644413 Eucalyptus grandis
Eucgr.K00590 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6640489-6642488 Eucalyptus grandis
Eucgr.K00590 2.0kb downstream 2.0kb downstream 3925 true Chr11: 6642489-6646413 Eucalyptus grandis
Eucgr.K00590 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6644414-6646413 Eucalyptus grandis
Eucgr.K00590 5.0kb upstream 5.0kb upstream 6925 true Chr11: 6637489-6644413 Eucalyptus grandis
Eucgr.K00590 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6637489-6642488 Eucalyptus grandis
Eucgr.K00590 5.0kb downstream 5.0kb downstream 6925 true Chr11: 6642489-6649413 Eucalyptus grandis
Eucgr.K00590 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6644414-6649413 Eucalyptus grandis
Eucgr.K00590 10.0kb upstream 10.0kb upstream 11925 true Chr11: 6632489-6644413 Eucalyptus grandis
Eucgr.K00590 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6632489-6642488 Eucalyptus grandis
Eucgr.K00590 10.0kb downstream 10.0kb downstream 11925 true Chr11: 6642489-6654413 Eucalyptus grandis
Eucgr.K00590 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6644414-6654413 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068997 5270 Rosid View MSA
123743187 5271 Pentapetalae View MSA
122792251 5272 Eudicot View MSA
122048918 5273 Angiosperm View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4292 0.0 45.0356   Low
cufflinks 38.6005 0.0 88.3966 High  
cufflinks 21.9968 0.0 52.8109    
cufflinks 57.5366 0.0 128.715 High High
cufflinks 25.446 0.0 60.3226    
cufflinks 55.3338 0.0 124.258 High High

0 Strain