Gene : Eucgr.K00557 E. grandis v2.0
Defline:  (1 of 1) PTHR36027:SF1 - ASYNAPTIC 3 Genomic Order:  474
Name:  ? Eucgr.K00557 Secondary Identifier:  ? PAC:32067487
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00557 0.5kb upstream 0.5kb upstream 5804 true Chr11: 6245490-6251293 Eucalyptus grandis
Eucgr.K00557 0.5kb upstream 0.5kb upstream 500 false Chr11: 6250794-6251293 Eucalyptus grandis
Eucgr.K00557 0.5kb downstream 0.5kb downstream 5804 true Chr11: 6244990-6250793 Eucalyptus grandis
Eucgr.K00557 0.5kb downstream 0.5kb downstream 500 false Chr11: 6244990-6245489 Eucalyptus grandis
Eucgr.K00557 1.0kb upstream 1.0kb upstream 6304 true Chr11: 6245490-6251793 Eucalyptus grandis
Eucgr.K00557 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6250794-6251793 Eucalyptus grandis
Eucgr.K00557 1.0kb downstream 1.0kb downstream 6304 true Chr11: 6244490-6250793 Eucalyptus grandis
Eucgr.K00557 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6244490-6245489 Eucalyptus grandis
Eucgr.K00557 2.0kb upstream 2.0kb upstream 7304 true Chr11: 6245490-6252793 Eucalyptus grandis
Eucgr.K00557 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6250794-6252793 Eucalyptus grandis
Eucgr.K00557 2.0kb downstream 2.0kb downstream 7304 true Chr11: 6243490-6250793 Eucalyptus grandis
Eucgr.K00557 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6243490-6245489 Eucalyptus grandis
Eucgr.K00557 5.0kb upstream 5.0kb upstream 10304 true Chr11: 6245490-6255793 Eucalyptus grandis
Eucgr.K00557 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6250794-6255793 Eucalyptus grandis
Eucgr.K00557 5.0kb downstream 5.0kb downstream 10304 true Chr11: 6240490-6250793 Eucalyptus grandis
Eucgr.K00557 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6240490-6245489 Eucalyptus grandis
Eucgr.K00557 10.0kb upstream 10.0kb upstream 15304 true Chr11: 6245490-6260793 Eucalyptus grandis
Eucgr.K00557 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6250794-6260793 Eucalyptus grandis
Eucgr.K00557 10.0kb downstream 10.0kb downstream 15304 true Chr11: 6235490-6250793 Eucalyptus grandis
Eucgr.K00557 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6235490-6245489 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026354 5273 Angiosperm View MSA
124064742 5270 Rosid View MSA
123736422 5271 Pentapetalae View MSA
122789139 5272 Eudicot View MSA
121296292 5274 Embryophyte View MSA
123334482 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.59222 0.0 1.68065    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.464382 0.0 1.34645    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.212858 0.0 0.684568 Low Low

0 Strain