Gene : Eucgr.K00550 E. grandis v2.0
Defline:  (1 of 11) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Genomic Order:  467
Name:  ? Eucgr.K00550 Secondary Identifier:  ? PAC:32069312
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00550 0.5kb upstream 0.5kb upstream 3037 true Chr11: 6186969-6190005 Eucalyptus grandis
Eucgr.K00550 0.5kb upstream 0.5kb upstream 500 false Chr11: 6189506-6190005 Eucalyptus grandis
Eucgr.K00550 0.5kb downstream 0.5kb downstream 3037 true Chr11: 6186469-6189505 Eucalyptus grandis
Eucgr.K00550 0.5kb downstream 0.5kb downstream 500 false Chr11: 6186469-6186968 Eucalyptus grandis
Eucgr.K00550 1.0kb upstream 1.0kb upstream 3537 true Chr11: 6186969-6190505 Eucalyptus grandis
Eucgr.K00550 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6189506-6190505 Eucalyptus grandis
Eucgr.K00550 1.0kb downstream 1.0kb downstream 3537 true Chr11: 6185969-6189505 Eucalyptus grandis
Eucgr.K00550 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6185969-6186968 Eucalyptus grandis
Eucgr.K00550 2.0kb upstream 2.0kb upstream 4537 true Chr11: 6186969-6191505 Eucalyptus grandis
Eucgr.K00550 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6189506-6191505 Eucalyptus grandis
Eucgr.K00550 2.0kb downstream 2.0kb downstream 4537 true Chr11: 6184969-6189505 Eucalyptus grandis
Eucgr.K00550 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6184969-6186968 Eucalyptus grandis
Eucgr.K00550 5.0kb upstream 5.0kb upstream 7537 true Chr11: 6186969-6194505 Eucalyptus grandis
Eucgr.K00550 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6189506-6194505 Eucalyptus grandis
Eucgr.K00550 5.0kb downstream 5.0kb downstream 7537 true Chr11: 6181969-6189505 Eucalyptus grandis
Eucgr.K00550 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6181969-6186968 Eucalyptus grandis
Eucgr.K00550 10.0kb upstream 10.0kb upstream 12537 true Chr11: 6186969-6199505 Eucalyptus grandis
Eucgr.K00550 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6189506-6199505 Eucalyptus grandis
Eucgr.K00550 10.0kb downstream 10.0kb downstream 12537 true Chr11: 6176969-6189505 Eucalyptus grandis
Eucgr.K00550 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6176969-6186968 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050675 5270 Rosid View MSA
123749910 5271 Pentapetalae View MSA
122795720 5272 Eudicot View MSA
122050009 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.411883 0.0 1.39437 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain