Gene : Eucgr.K00551 E. grandis v2.0
Defline:  (1 of 11) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Genomic Order:  468
Name:  ? Eucgr.K00551 Secondary Identifier:  ? PAC:32069287
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00551 0.5kb upstream 0.5kb upstream 8816 true Chr11: 6192093-6200908 Eucalyptus grandis
Eucgr.K00551 0.5kb upstream 0.5kb upstream 500 false Chr11: 6200409-6200908 Eucalyptus grandis
Eucgr.K00551 0.5kb downstream 0.5kb downstream 8816 true Chr11: 6191593-6200408 Eucalyptus grandis
Eucgr.K00551 0.5kb downstream 0.5kb downstream 500 false Chr11: 6191593-6192092 Eucalyptus grandis
Eucgr.K00551 1.0kb upstream 1.0kb upstream 9316 true Chr11: 6192093-6201408 Eucalyptus grandis
Eucgr.K00551 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6200409-6201408 Eucalyptus grandis
Eucgr.K00551 1.0kb downstream 1.0kb downstream 9316 true Chr11: 6191093-6200408 Eucalyptus grandis
Eucgr.K00551 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6191093-6192092 Eucalyptus grandis
Eucgr.K00551 2.0kb upstream 2.0kb upstream 10316 true Chr11: 6192093-6202408 Eucalyptus grandis
Eucgr.K00551 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6200409-6202408 Eucalyptus grandis
Eucgr.K00551 2.0kb downstream 2.0kb downstream 10316 true Chr11: 6190093-6200408 Eucalyptus grandis
Eucgr.K00551 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6190093-6192092 Eucalyptus grandis
Eucgr.K00551 5.0kb upstream 5.0kb upstream 13316 true Chr11: 6192093-6205408 Eucalyptus grandis
Eucgr.K00551 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6200409-6205408 Eucalyptus grandis
Eucgr.K00551 5.0kb downstream 5.0kb downstream 13316 true Chr11: 6187093-6200408 Eucalyptus grandis
Eucgr.K00551 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6187093-6192092 Eucalyptus grandis
Eucgr.K00551 10.0kb upstream 10.0kb upstream 18316 true Chr11: 6192093-6210408 Eucalyptus grandis
Eucgr.K00551 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6200409-6210408 Eucalyptus grandis
Eucgr.K00551 10.0kb downstream 10.0kb downstream 18316 true Chr11: 6182093-6200408 Eucalyptus grandis
Eucgr.K00551 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6182093-6192092 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050675 5270 Rosid View MSA
123749910 5271 Pentapetalae View MSA
122795720 5272 Eudicot View MSA
122050009 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.5019 0.0 42.3457    
cufflinks 3.92981 0.0 10.236   Low
cufflinks 6.27101 0.0 15.3839    
cufflinks 112.438 0.0 311.686 High High
cufflinks 36.9935 0.0 83.3324    
cufflinks 15.4759 0.0 41.6457    

0 Strain