Gene : Eucgr.K00480 E. grandis v2.0
Defline:  (1 of 3) PTHR14110//PTHR14110:SF6 - MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 Genomic Order:  381
Name:  ? Eucgr.K00480 Secondary Identifier:  ? PAC:32068358
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00480 0.5kb upstream 0.5kb upstream 4255 true Chr11: 4430614-4434868 Eucalyptus grandis
Eucgr.K00480 0.5kb upstream 0.5kb upstream 500 false Chr11: 4430614-4431113 Eucalyptus grandis
Eucgr.K00480 0.5kb downstream 0.5kb downstream 4255 true Chr11: 4431114-4435368 Eucalyptus grandis
Eucgr.K00480 0.5kb downstream 0.5kb downstream 500 false Chr11: 4434869-4435368 Eucalyptus grandis
Eucgr.K00480 1.0kb upstream 1.0kb upstream 4755 true Chr11: 4430114-4434868 Eucalyptus grandis
Eucgr.K00480 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4430114-4431113 Eucalyptus grandis
Eucgr.K00480 1.0kb downstream 1.0kb downstream 4755 true Chr11: 4431114-4435868 Eucalyptus grandis
Eucgr.K00480 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4434869-4435868 Eucalyptus grandis
Eucgr.K00480 2.0kb upstream 2.0kb upstream 5755 true Chr11: 4429114-4434868 Eucalyptus grandis
Eucgr.K00480 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4429114-4431113 Eucalyptus grandis
Eucgr.K00480 2.0kb downstream 2.0kb downstream 5755 true Chr11: 4431114-4436868 Eucalyptus grandis
Eucgr.K00480 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4434869-4436868 Eucalyptus grandis
Eucgr.K00480 5.0kb upstream 5.0kb upstream 8755 true Chr11: 4426114-4434868 Eucalyptus grandis
Eucgr.K00480 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4426114-4431113 Eucalyptus grandis
Eucgr.K00480 5.0kb downstream 5.0kb downstream 8755 true Chr11: 4431114-4439868 Eucalyptus grandis
Eucgr.K00480 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4434869-4439868 Eucalyptus grandis
Eucgr.K00480 10.0kb upstream 10.0kb upstream 13755 true Chr11: 4421114-4434868 Eucalyptus grandis
Eucgr.K00480 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4421114-4431113 Eucalyptus grandis
Eucgr.K00480 10.0kb downstream 10.0kb downstream 13755 true Chr11: 4431114-4444868 Eucalyptus grandis
Eucgr.K00480 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4434869-4444868 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063429 5270 Rosid View MSA
123741694 5271 Pentapetalae View MSA
122789967 5272 Eudicot View MSA
122045170 5273 Angiosperm View MSA
121345051 5274 Embryophyte View MSA
123428187 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0728 0.0 25.5346    
cufflinks 6.49813 0.0 15.6242    
cufflinks 9.42287 0.0 21.994    
cufflinks 4.67429 0.0 11.8903   Low
cufflinks 5.59335 0.0 13.834    
cufflinks 11.516 0.0 26.5564   High

0 Strain