Gene : Eucgr.K00451 E. grandis v2.0
Defline:  (1 of 6) PTHR21713 - NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Genomic Order:  357
Name:  ? Eucgr.K00451 Secondary Identifier:  ? PAC:32068178
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00451 0.5kb upstream 0.5kb upstream 848 true Chr11: 4167728-4168575 Eucalyptus grandis
Eucgr.K00451 0.5kb upstream 0.5kb upstream 500 false Chr11: 4167728-4168227 Eucalyptus grandis
Eucgr.K00451 0.5kb downstream 0.5kb downstream 848 true Chr11: 4168228-4169075 Eucalyptus grandis
Eucgr.K00451 0.5kb downstream 0.5kb downstream 500 false Chr11: 4168576-4169075 Eucalyptus grandis
Eucgr.K00451 1.0kb upstream 1.0kb upstream 1348 true Chr11: 4167228-4168575 Eucalyptus grandis
Eucgr.K00451 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4167228-4168227 Eucalyptus grandis
Eucgr.K00451 1.0kb downstream 1.0kb downstream 1348 true Chr11: 4168228-4169575 Eucalyptus grandis
Eucgr.K00451 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4168576-4169575 Eucalyptus grandis
Eucgr.K00451 2.0kb upstream 2.0kb upstream 2348 true Chr11: 4166228-4168575 Eucalyptus grandis
Eucgr.K00451 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4166228-4168227 Eucalyptus grandis
Eucgr.K00451 2.0kb downstream 2.0kb downstream 2348 true Chr11: 4168228-4170575 Eucalyptus grandis
Eucgr.K00451 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4168576-4170575 Eucalyptus grandis
Eucgr.K00451 5.0kb upstream 5.0kb upstream 5348 true Chr11: 4163228-4168575 Eucalyptus grandis
Eucgr.K00451 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4163228-4168227 Eucalyptus grandis
Eucgr.K00451 5.0kb downstream 5.0kb downstream 5348 true Chr11: 4168228-4173575 Eucalyptus grandis
Eucgr.K00451 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4168576-4173575 Eucalyptus grandis
Eucgr.K00451 10.0kb upstream 10.0kb upstream 10348 true Chr11: 4158228-4168575 Eucalyptus grandis
Eucgr.K00451 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4158228-4168227 Eucalyptus grandis
Eucgr.K00451 10.0kb downstream 10.0kb downstream 10348 true Chr11: 4168228-4178575 Eucalyptus grandis
Eucgr.K00451 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4168576-4178575 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051538 5270 Rosid View MSA
123753516 5271 Pentapetalae View MSA
122797192 5272 Eudicot View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.939 0.0 96.336 High  
cufflinks 19.9904 0.0 52.522   Low
cufflinks 37.1853 0.0 93.3107 High  
cufflinks 37.9978 0.0 94.9436 High  
cufflinks 48.7511 0.0 117.574 High  
cufflinks 52.5393 0.0 128.163 High  

0 Strain