Gene : Eucgr.K01372 E. grandis v2.0
Defline:  (1 of 1) PTHR22572:SF101 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  1154
Name:  ? Eucgr.K01372 Secondary Identifier:  ? PAC:32067933
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLYCOGENSYNTH-PWY Eucalyptus grandis pathologic  
Egrandis PWY-622 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01372 0.5kb upstream 0.5kb upstream 5137 true Chr11: 17036430-17041566 Eucalyptus grandis
Eucgr.K01372 0.5kb upstream 0.5kb upstream 500 false Chr11: 17041067-17041566 Eucalyptus grandis
Eucgr.K01372 0.5kb downstream 0.5kb downstream 5137 true Chr11: 17035930-17041066 Eucalyptus grandis
Eucgr.K01372 0.5kb downstream 0.5kb downstream 500 false Chr11: 17035930-17036429 Eucalyptus grandis
Eucgr.K01372 1.0kb upstream 1.0kb upstream 5637 true Chr11: 17036430-17042066 Eucalyptus grandis
Eucgr.K01372 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17041067-17042066 Eucalyptus grandis
Eucgr.K01372 1.0kb downstream 1.0kb downstream 5637 true Chr11: 17035430-17041066 Eucalyptus grandis
Eucgr.K01372 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17035430-17036429 Eucalyptus grandis
Eucgr.K01372 2.0kb upstream 2.0kb upstream 6637 true Chr11: 17036430-17043066 Eucalyptus grandis
Eucgr.K01372 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17041067-17043066 Eucalyptus grandis
Eucgr.K01372 2.0kb downstream 2.0kb downstream 6637 true Chr11: 17034430-17041066 Eucalyptus grandis
Eucgr.K01372 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17034430-17036429 Eucalyptus grandis
Eucgr.K01372 5.0kb upstream 5.0kb upstream 9637 true Chr11: 17036430-17046066 Eucalyptus grandis
Eucgr.K01372 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17041067-17046066 Eucalyptus grandis
Eucgr.K01372 5.0kb downstream 5.0kb downstream 9637 true Chr11: 17031430-17041066 Eucalyptus grandis
Eucgr.K01372 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17031430-17036429 Eucalyptus grandis
Eucgr.K01372 10.0kb upstream 10.0kb upstream 14637 true Chr11: 17036430-17051066 Eucalyptus grandis
Eucgr.K01372 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17041067-17051066 Eucalyptus grandis
Eucgr.K01372 10.0kb downstream 10.0kb downstream 14637 true Chr11: 17026430-17041066 Eucalyptus grandis
Eucgr.K01372 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17026430-17036429 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9242 0.0 49.3961    
cufflinks 33.4932 0.0 78.507    
cufflinks 15.9678 0.0 37.4079    
cufflinks 9.02923 0.0 21.0711   Low
cufflinks 15.0001 0.0 34.1839    
cufflinks 63.1134 0.0 147.933 High High

0 Strain