Gene : Eucgr.K01391 E. grandis v2.0
Defline:  (1 of 1) PTHR23315:SF88 - ARM REPEAT PROTEIN Genomic Order:  1170
Name:  ? Eucgr.K01391 Secondary Identifier:  ? PAC:32069656
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7511 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01391 0.5kb upstream 0.5kb upstream 3952 true Chr11: 17299459-17303410 Eucalyptus grandis
Eucgr.K01391 0.5kb upstream 0.5kb upstream 500 false Chr11: 17302911-17303410 Eucalyptus grandis
Eucgr.K01391 0.5kb downstream 0.5kb downstream 3952 true Chr11: 17298959-17302910 Eucalyptus grandis
Eucgr.K01391 0.5kb downstream 0.5kb downstream 500 false Chr11: 17298959-17299458 Eucalyptus grandis
Eucgr.K01391 1.0kb upstream 1.0kb upstream 4452 true Chr11: 17299459-17303910 Eucalyptus grandis
Eucgr.K01391 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17302911-17303910 Eucalyptus grandis
Eucgr.K01391 1.0kb downstream 1.0kb downstream 4452 true Chr11: 17298459-17302910 Eucalyptus grandis
Eucgr.K01391 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17298459-17299458 Eucalyptus grandis
Eucgr.K01391 2.0kb upstream 2.0kb upstream 5452 true Chr11: 17299459-17304910 Eucalyptus grandis
Eucgr.K01391 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17302911-17304910 Eucalyptus grandis
Eucgr.K01391 2.0kb downstream 2.0kb downstream 5452 true Chr11: 17297459-17302910 Eucalyptus grandis
Eucgr.K01391 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17297459-17299458 Eucalyptus grandis
Eucgr.K01391 5.0kb upstream 5.0kb upstream 8452 true Chr11: 17299459-17307910 Eucalyptus grandis
Eucgr.K01391 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17302911-17307910 Eucalyptus grandis
Eucgr.K01391 5.0kb downstream 5.0kb downstream 8452 true Chr11: 17294459-17302910 Eucalyptus grandis
Eucgr.K01391 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17294459-17299458 Eucalyptus grandis
Eucgr.K01391 10.0kb upstream 10.0kb upstream 13452 true Chr11: 17299459-17312910 Eucalyptus grandis
Eucgr.K01391 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17302911-17312910 Eucalyptus grandis
Eucgr.K01391 10.0kb downstream 10.0kb downstream 13452 true Chr11: 17289459-17302910 Eucalyptus grandis
Eucgr.K01391 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17289459-17299458 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2829 0.0 27.587    
cufflinks 9.28617 0.0 21.1866    
cufflinks 13.1477 0.0 29.4576    
cufflinks 8.94024 0.0 20.4576    
cufflinks 7.87931 0.0 18.1855   Low
cufflinks 14.2532 0.0 31.8483   High

0 Strain