Gene : Eucgr.K01365 E. grandis v2.0
Defline:  (1 of 1) KOG1781 - Small Nuclear ribonucleoprotein splicing factor Genomic Order:  1147
Name:  ? Eucgr.K01365 Secondary Identifier:  ? PAC:32067053
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01365 0.5kb upstream 0.5kb upstream 4749 true Chr11: 16997165-17001913 Eucalyptus grandis
Eucgr.K01365 0.5kb upstream 0.5kb upstream 500 false Chr11: 17001414-17001913 Eucalyptus grandis
Eucgr.K01365 0.5kb downstream 0.5kb downstream 4749 true Chr11: 16996665-17001413 Eucalyptus grandis
Eucgr.K01365 0.5kb downstream 0.5kb downstream 500 false Chr11: 16996665-16997164 Eucalyptus grandis
Eucgr.K01365 1.0kb upstream 1.0kb upstream 5249 true Chr11: 16997165-17002413 Eucalyptus grandis
Eucgr.K01365 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17001414-17002413 Eucalyptus grandis
Eucgr.K01365 1.0kb downstream 1.0kb downstream 5249 true Chr11: 16996165-17001413 Eucalyptus grandis
Eucgr.K01365 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16996165-16997164 Eucalyptus grandis
Eucgr.K01365 2.0kb upstream 2.0kb upstream 6249 true Chr11: 16997165-17003413 Eucalyptus grandis
Eucgr.K01365 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17001414-17003413 Eucalyptus grandis
Eucgr.K01365 2.0kb downstream 2.0kb downstream 6249 true Chr11: 16995165-17001413 Eucalyptus grandis
Eucgr.K01365 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16995165-16997164 Eucalyptus grandis
Eucgr.K01365 5.0kb upstream 5.0kb upstream 9249 true Chr11: 16997165-17006413 Eucalyptus grandis
Eucgr.K01365 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17001414-17006413 Eucalyptus grandis
Eucgr.K01365 5.0kb downstream 5.0kb downstream 9249 true Chr11: 16992165-17001413 Eucalyptus grandis
Eucgr.K01365 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16992165-16997164 Eucalyptus grandis
Eucgr.K01365 10.0kb upstream 10.0kb upstream 14249 true Chr11: 16997165-17011413 Eucalyptus grandis
Eucgr.K01365 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17001414-17011413 Eucalyptus grandis
Eucgr.K01365 10.0kb downstream 10.0kb downstream 14249 true Chr11: 16987165-17001413 Eucalyptus grandis
Eucgr.K01365 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16987165-16997164 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062559 5270 Rosid View MSA
123737808 5271 Pentapetalae View MSA
122791526 5272 Eudicot View MSA
122051368 5273 Angiosperm View MSA
121349484 5274 Embryophyte View MSA
123423999 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.0663 0.0 137.153 High  
cufflinks 52.8033 0.0 143.02 High  
cufflinks 43.9906 0.0 117.968 High  
cufflinks 55.9737 0.0 136.611 High  
cufflinks 87.1923 0.0 238.509 High High
cufflinks 30.8134 0.0 76.2354   Low

0 Strain