Gene : Eucgr.K01225 E. grandis v2.0
Defline:  (1 of 1) PTHR22807:SF34 - METHYLTRANSFERASE NSUN6-RELATED Genomic Order:  1018
Name:  ? Eucgr.K01225 Secondary Identifier:  ? PAC:32067756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01225 0.5kb upstream 0.5kb upstream 8634 true Chr11: 15702218-15710851 Eucalyptus grandis
Eucgr.K01225 0.5kb upstream 0.5kb upstream 500 false Chr11: 15702218-15702717 Eucalyptus grandis
Eucgr.K01225 0.5kb downstream 0.5kb downstream 8634 true Chr11: 15702718-15711351 Eucalyptus grandis
Eucgr.K01225 0.5kb downstream 0.5kb downstream 500 false Chr11: 15710852-15711351 Eucalyptus grandis
Eucgr.K01225 1.0kb upstream 1.0kb upstream 9134 true Chr11: 15701718-15710851 Eucalyptus grandis
Eucgr.K01225 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15701718-15702717 Eucalyptus grandis
Eucgr.K01225 1.0kb downstream 1.0kb downstream 9134 true Chr11: 15702718-15711851 Eucalyptus grandis
Eucgr.K01225 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15710852-15711851 Eucalyptus grandis
Eucgr.K01225 2.0kb upstream 2.0kb upstream 10134 true Chr11: 15700718-15710851 Eucalyptus grandis
Eucgr.K01225 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15700718-15702717 Eucalyptus grandis
Eucgr.K01225 2.0kb downstream 2.0kb downstream 10134 true Chr11: 15702718-15712851 Eucalyptus grandis
Eucgr.K01225 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15710852-15712851 Eucalyptus grandis
Eucgr.K01225 5.0kb upstream 5.0kb upstream 13134 true Chr11: 15697718-15710851 Eucalyptus grandis
Eucgr.K01225 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15697718-15702717 Eucalyptus grandis
Eucgr.K01225 5.0kb downstream 5.0kb downstream 13134 true Chr11: 15702718-15715851 Eucalyptus grandis
Eucgr.K01225 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15710852-15715851 Eucalyptus grandis
Eucgr.K01225 10.0kb upstream 10.0kb upstream 18134 true Chr11: 15692718-15710851 Eucalyptus grandis
Eucgr.K01225 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15692718-15702717 Eucalyptus grandis
Eucgr.K01225 10.0kb downstream 10.0kb downstream 18134 true Chr11: 15702718-15720851 Eucalyptus grandis
Eucgr.K01225 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15710852-15720851 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026330 5273 Angiosperm View MSA
124064308 5270 Rosid View MSA
123740996 5271 Pentapetalae View MSA
122793735 5272 Eudicot View MSA
121346670 5274 Embryophyte View MSA
123427467 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.87522 0.0 7.30424   High
cufflinks 1.76926 0.0 4.89318    
cufflinks 2.34893 0.0 6.12987    
cufflinks 1.22288 0.0 3.49671   Low
cufflinks 1.07383 0.0 3.11508   Low
cufflinks 2.259 0.0 6.09684    

0 Strain