Gene : Eucgr.K01146 E. grandis v2.0
Defline:  (1 of 2) PF00226//PF13370 - DnaJ domain (DnaJ) // 4Fe-4S single cluster domain of Ferredoxin I (Fer4_13) Genomic Order:  963
Name:  ? Eucgr.K01146 Secondary Identifier:  ? PAC:32068306
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01146 0.5kb upstream 0.5kb upstream 7390 true Chr11: 14780391-14787780 Eucalyptus grandis
Eucgr.K01146 0.5kb upstream 0.5kb upstream 500 false Chr11: 14780391-14780890 Eucalyptus grandis
Eucgr.K01146 0.5kb downstream 0.5kb downstream 7390 true Chr11: 14780891-14788280 Eucalyptus grandis
Eucgr.K01146 0.5kb downstream 0.5kb downstream 500 false Chr11: 14787781-14788280 Eucalyptus grandis
Eucgr.K01146 1.0kb upstream 1.0kb upstream 7890 true Chr11: 14779891-14787780 Eucalyptus grandis
Eucgr.K01146 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14779891-14780890 Eucalyptus grandis
Eucgr.K01146 1.0kb downstream 1.0kb downstream 7890 true Chr11: 14780891-14788780 Eucalyptus grandis
Eucgr.K01146 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14787781-14788780 Eucalyptus grandis
Eucgr.K01146 2.0kb upstream 2.0kb upstream 8890 true Chr11: 14778891-14787780 Eucalyptus grandis
Eucgr.K01146 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14778891-14780890 Eucalyptus grandis
Eucgr.K01146 2.0kb downstream 2.0kb downstream 8890 true Chr11: 14780891-14789780 Eucalyptus grandis
Eucgr.K01146 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14787781-14789780 Eucalyptus grandis
Eucgr.K01146 5.0kb upstream 5.0kb upstream 11890 true Chr11: 14775891-14787780 Eucalyptus grandis
Eucgr.K01146 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14775891-14780890 Eucalyptus grandis
Eucgr.K01146 5.0kb downstream 5.0kb downstream 11890 true Chr11: 14780891-14792780 Eucalyptus grandis
Eucgr.K01146 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14787781-14792780 Eucalyptus grandis
Eucgr.K01146 10.0kb upstream 10.0kb upstream 16890 true Chr11: 14770891-14787780 Eucalyptus grandis
Eucgr.K01146 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14770891-14780890 Eucalyptus grandis
Eucgr.K01146 10.0kb downstream 10.0kb downstream 16890 true Chr11: 14780891-14797780 Eucalyptus grandis
Eucgr.K01146 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14787781-14797780 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068591 5270 Rosid View MSA
123739808 5271 Pentapetalae View MSA
122790133 5272 Eudicot View MSA
122045316 5273 Angiosperm View MSA
121346965 5274 Embryophyte View MSA
123428421 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.00362 0.0 16.9657    
cufflinks 7.11832 0.0 17.0615    
cufflinks 6.65309 0.0 16.2526    
cufflinks 5.62591 0.0 13.9806    
cufflinks 8.99597 0.0 21.1375    
cufflinks 50.0899 0.0 114.577 High High

0 Strain