Gene : Eucgr.K01053 E. grandis v2.0
Defline:  (1 of 2) PTHR10943 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT Genomic Order:  884
Name:  ? Eucgr.K01053 Secondary Identifier:  ? PAC:32066589
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01053 0.5kb upstream 0.5kb upstream 10010 true Chr11: 13516374-13526383 Eucalyptus grandis
Eucgr.K01053 0.5kb upstream 0.5kb upstream 500 false Chr11: 13525884-13526383 Eucalyptus grandis
Eucgr.K01053 0.5kb downstream 0.5kb downstream 10010 true Chr11: 13515874-13525883 Eucalyptus grandis
Eucgr.K01053 0.5kb downstream 0.5kb downstream 500 false Chr11: 13515874-13516373 Eucalyptus grandis
Eucgr.K01053 1.0kb upstream 1.0kb upstream 10510 true Chr11: 13516374-13526883 Eucalyptus grandis
Eucgr.K01053 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13525884-13526883 Eucalyptus grandis
Eucgr.K01053 1.0kb downstream 1.0kb downstream 10510 true Chr11: 13515374-13525883 Eucalyptus grandis
Eucgr.K01053 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13515374-13516373 Eucalyptus grandis
Eucgr.K01053 2.0kb upstream 2.0kb upstream 11510 true Chr11: 13516374-13527883 Eucalyptus grandis
Eucgr.K01053 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13525884-13527883 Eucalyptus grandis
Eucgr.K01053 2.0kb downstream 2.0kb downstream 11510 true Chr11: 13514374-13525883 Eucalyptus grandis
Eucgr.K01053 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13514374-13516373 Eucalyptus grandis
Eucgr.K01053 5.0kb upstream 5.0kb upstream 14510 true Chr11: 13516374-13530883 Eucalyptus grandis
Eucgr.K01053 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13525884-13530883 Eucalyptus grandis
Eucgr.K01053 5.0kb downstream 5.0kb downstream 14510 true Chr11: 13511374-13525883 Eucalyptus grandis
Eucgr.K01053 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13511374-13516373 Eucalyptus grandis
Eucgr.K01053 10.0kb upstream 10.0kb upstream 19510 true Chr11: 13516374-13535883 Eucalyptus grandis
Eucgr.K01053 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13525884-13535883 Eucalyptus grandis
Eucgr.K01053 10.0kb downstream 10.0kb downstream 19510 true Chr11: 13506374-13525883 Eucalyptus grandis
Eucgr.K01053 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13506374-13516373 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062825 5270 Rosid View MSA
123743224 5271 Pentapetalae View MSA
122786983 5272 Eudicot View MSA
122042231 5273 Angiosperm View MSA
123428994 5275 Viridiplantae View MSA
121346933 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.4632 0.0 73.1034 High  
cufflinks 24.6683 0.0 58.5326    
cufflinks 27.9741 0.0 74.7177 High  
cufflinks 23.2659 0.0 59.7759    
cufflinks 17.5411 0.0 43.5518   Low
cufflinks 33.0718 0.0 75.0616   High

0 Strain