Gene : Eucgr.K01058 E. grandis v2.0
Defline:  (1 of 1) PF00046//PF02791//PF05066//PF15612//PF15613 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) Genomic Order:  889
Name:  ? Eucgr.K01058 Secondary Identifier:  ? PAC:32068874
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01058 0.5kb upstream 0.5kb upstream 13944 true Chr11: 13558879-13572822 Eucalyptus grandis
Eucgr.K01058 0.5kb upstream 0.5kb upstream 500 false Chr11: 13572323-13572822 Eucalyptus grandis
Eucgr.K01058 0.5kb downstream 0.5kb downstream 13944 true Chr11: 13558379-13572322 Eucalyptus grandis
Eucgr.K01058 0.5kb downstream 0.5kb downstream 500 false Chr11: 13558379-13558878 Eucalyptus grandis
Eucgr.K01058 1.0kb upstream 1.0kb upstream 14444 true Chr11: 13558879-13573322 Eucalyptus grandis
Eucgr.K01058 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13572323-13573322 Eucalyptus grandis
Eucgr.K01058 1.0kb downstream 1.0kb downstream 14444 true Chr11: 13557879-13572322 Eucalyptus grandis
Eucgr.K01058 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13557879-13558878 Eucalyptus grandis
Eucgr.K01058 2.0kb upstream 2.0kb upstream 15444 true Chr11: 13558879-13574322 Eucalyptus grandis
Eucgr.K01058 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13572323-13574322 Eucalyptus grandis
Eucgr.K01058 2.0kb downstream 2.0kb downstream 15444 true Chr11: 13556879-13572322 Eucalyptus grandis
Eucgr.K01058 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13556879-13558878 Eucalyptus grandis
Eucgr.K01058 5.0kb upstream 5.0kb upstream 18444 true Chr11: 13558879-13577322 Eucalyptus grandis
Eucgr.K01058 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13572323-13577322 Eucalyptus grandis
Eucgr.K01058 5.0kb downstream 5.0kb downstream 18444 true Chr11: 13553879-13572322 Eucalyptus grandis
Eucgr.K01058 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13553879-13558878 Eucalyptus grandis
Eucgr.K01058 10.0kb upstream 10.0kb upstream 23444 true Chr11: 13558879-13582322 Eucalyptus grandis
Eucgr.K01058 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13572323-13582322 Eucalyptus grandis
Eucgr.K01058 10.0kb downstream 10.0kb downstream 23444 true Chr11: 13548879-13572322 Eucalyptus grandis
Eucgr.K01058 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13548879-13558878 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069157 5270 Rosid View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9603 0.0 48.1009    
cufflinks 12.7956 0.0 28.6304    
cufflinks 20.6177 0.0 47.3589    
cufflinks 9.47267 0.0 21.0307   Low
cufflinks 12.7433 0.0 28.4997    
cufflinks 21.1821 0.0 48.5605    

0 Strain