Gene : Eucgr.K01029 E. grandis v2.0
Defline:  (1 of 3) PTHR10037 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM Genomic Order:  862
Name:  ? Eucgr.K01029 Secondary Identifier:  ? PAC:32069334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01029 0.5kb upstream 0.5kb upstream 15667 true Chr11: 13182999-13198665 Eucalyptus grandis
Eucgr.K01029 0.5kb upstream 0.5kb upstream 500 false Chr11: 13182999-13183498 Eucalyptus grandis
Eucgr.K01029 0.5kb downstream 0.5kb downstream 15667 true Chr11: 13183499-13199165 Eucalyptus grandis
Eucgr.K01029 0.5kb downstream 0.5kb downstream 500 false Chr11: 13198666-13199165 Eucalyptus grandis
Eucgr.K01029 1.0kb upstream 1.0kb upstream 16167 true Chr11: 13182499-13198665 Eucalyptus grandis
Eucgr.K01029 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13182499-13183498 Eucalyptus grandis
Eucgr.K01029 1.0kb downstream 1.0kb downstream 16167 true Chr11: 13183499-13199665 Eucalyptus grandis
Eucgr.K01029 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13198666-13199665 Eucalyptus grandis
Eucgr.K01029 2.0kb upstream 2.0kb upstream 17167 true Chr11: 13181499-13198665 Eucalyptus grandis
Eucgr.K01029 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13181499-13183498 Eucalyptus grandis
Eucgr.K01029 2.0kb downstream 2.0kb downstream 17167 true Chr11: 13183499-13200665 Eucalyptus grandis
Eucgr.K01029 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13198666-13200665 Eucalyptus grandis
Eucgr.K01029 5.0kb upstream 5.0kb upstream 20167 true Chr11: 13178499-13198665 Eucalyptus grandis
Eucgr.K01029 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13178499-13183498 Eucalyptus grandis
Eucgr.K01029 5.0kb downstream 5.0kb downstream 20167 true Chr11: 13183499-13203665 Eucalyptus grandis
Eucgr.K01029 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13198666-13203665 Eucalyptus grandis
Eucgr.K01029 10.0kb upstream 10.0kb upstream 25167 true Chr11: 13173499-13198665 Eucalyptus grandis
Eucgr.K01029 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13173499-13183498 Eucalyptus grandis
Eucgr.K01029 10.0kb downstream 10.0kb downstream 25167 true Chr11: 13183499-13208665 Eucalyptus grandis
Eucgr.K01029 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13198666-13208665 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050278 5270 Rosid View MSA
123736366 5271 Pentapetalae View MSA
122789852 5272 Eudicot View MSA
122042673 5273 Angiosperm View MSA
121347876 5274 Embryophyte View MSA
123380661 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.21688 0.0 11.6922   Low
cufflinks 25.9543 0.0 59.1459    
cufflinks 9.60263 0.0 22.3808    
cufflinks 32.9668 0.0 76.1591   High
cufflinks 24.8929 0.0 56.3958    
cufflinks 11.1096 0.0 25.9395    

0 Strain