Gene : Eucgr.K01826 E. grandis v2.0
Defline:  (1 of 2) PTHR14894 - CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3 Genomic Order:  1536
Name:  ? Eucgr.K01826 Secondary Identifier:  ? PAC:32065848
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01826 0.5kb upstream 0.5kb upstream 5921 true Chr11: 23797212-23803132 Eucalyptus grandis
Eucgr.K01826 0.5kb upstream 0.5kb upstream 500 false Chr11: 23797212-23797711 Eucalyptus grandis
Eucgr.K01826 0.5kb downstream 0.5kb downstream 5921 true Chr11: 23797712-23803632 Eucalyptus grandis
Eucgr.K01826 0.5kb downstream 0.5kb downstream 500 false Chr11: 23803133-23803632 Eucalyptus grandis
Eucgr.K01826 1.0kb upstream 1.0kb upstream 6421 true Chr11: 23796712-23803132 Eucalyptus grandis
Eucgr.K01826 1.0kb upstream 1.0kb upstream 1000 false Chr11: 23796712-23797711 Eucalyptus grandis
Eucgr.K01826 1.0kb downstream 1.0kb downstream 6421 true Chr11: 23797712-23804132 Eucalyptus grandis
Eucgr.K01826 1.0kb downstream 1.0kb downstream 1000 false Chr11: 23803133-23804132 Eucalyptus grandis
Eucgr.K01826 2.0kb upstream 2.0kb upstream 7421 true Chr11: 23795712-23803132 Eucalyptus grandis
Eucgr.K01826 2.0kb upstream 2.0kb upstream 2000 false Chr11: 23795712-23797711 Eucalyptus grandis
Eucgr.K01826 2.0kb downstream 2.0kb downstream 7421 true Chr11: 23797712-23805132 Eucalyptus grandis
Eucgr.K01826 2.0kb downstream 2.0kb downstream 2000 false Chr11: 23803133-23805132 Eucalyptus grandis
Eucgr.K01826 5.0kb upstream 5.0kb upstream 10421 true Chr11: 23792712-23803132 Eucalyptus grandis
Eucgr.K01826 5.0kb upstream 5.0kb upstream 5000 false Chr11: 23792712-23797711 Eucalyptus grandis
Eucgr.K01826 5.0kb downstream 5.0kb downstream 10421 true Chr11: 23797712-23808132 Eucalyptus grandis
Eucgr.K01826 5.0kb downstream 5.0kb downstream 5000 false Chr11: 23803133-23808132 Eucalyptus grandis
Eucgr.K01826 10.0kb upstream 10.0kb upstream 15421 true Chr11: 23787712-23803132 Eucalyptus grandis
Eucgr.K01826 10.0kb upstream 10.0kb upstream 10000 false Chr11: 23787712-23797711 Eucalyptus grandis
Eucgr.K01826 10.0kb downstream 10.0kb downstream 15421 true Chr11: 23797712-23813132 Eucalyptus grandis
Eucgr.K01826 10.0kb downstream 10.0kb downstream 10000 false Chr11: 23803133-23813132 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066574 5270 Rosid View MSA
123736525 5271 Pentapetalae View MSA
122787291 5272 Eudicot View MSA
122046505 5273 Angiosperm View MSA
121347618 5274 Embryophyte View MSA
123424733 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.87467 0.0 24.6136    
cufflinks 8.0242 0.0 19.8585    
cufflinks 12.0936 0.0 28.4573    
cufflinks 10.1863 0.0 23.9134    
cufflinks 7.02758 0.0 19.5834   Low
cufflinks 14.1699 0.0 38.9677   High

0 Strain