Gene : Eucgr.K01672 E. grandis v2.0
Defline:  (1 of 2) PTHR10516//PTHR10516:SF312 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  1346
Name:  ? Eucgr.K01672 Secondary Identifier:  ? PAC:32067754
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01672 0.5kb upstream 0.5kb upstream 3884 true Chr11: 19650488-19654371 Eucalyptus grandis
Eucgr.K01672 0.5kb upstream 0.5kb upstream 500 false Chr11: 19653872-19654371 Eucalyptus grandis
Eucgr.K01672 0.5kb downstream 0.5kb downstream 3884 true Chr11: 19649988-19653871 Eucalyptus grandis
Eucgr.K01672 0.5kb downstream 0.5kb downstream 500 false Chr11: 19649988-19650487 Eucalyptus grandis
Eucgr.K01672 1.0kb upstream 1.0kb upstream 4384 true Chr11: 19650488-19654871 Eucalyptus grandis
Eucgr.K01672 1.0kb upstream 1.0kb upstream 1000 false Chr11: 19653872-19654871 Eucalyptus grandis
Eucgr.K01672 1.0kb downstream 1.0kb downstream 4384 true Chr11: 19649488-19653871 Eucalyptus grandis
Eucgr.K01672 1.0kb downstream 1.0kb downstream 1000 false Chr11: 19649488-19650487 Eucalyptus grandis
Eucgr.K01672 2.0kb upstream 2.0kb upstream 5384 true Chr11: 19650488-19655871 Eucalyptus grandis
Eucgr.K01672 2.0kb upstream 2.0kb upstream 2000 false Chr11: 19653872-19655871 Eucalyptus grandis
Eucgr.K01672 2.0kb downstream 2.0kb downstream 5384 true Chr11: 19648488-19653871 Eucalyptus grandis
Eucgr.K01672 2.0kb downstream 2.0kb downstream 2000 false Chr11: 19648488-19650487 Eucalyptus grandis
Eucgr.K01672 5.0kb upstream 5.0kb upstream 8384 true Chr11: 19650488-19658871 Eucalyptus grandis
Eucgr.K01672 5.0kb upstream 5.0kb upstream 5000 false Chr11: 19653872-19658871 Eucalyptus grandis
Eucgr.K01672 5.0kb downstream 5.0kb downstream 8384 true Chr11: 19645488-19653871 Eucalyptus grandis
Eucgr.K01672 5.0kb downstream 5.0kb downstream 5000 false Chr11: 19645488-19650487 Eucalyptus grandis
Eucgr.K01672 10.0kb upstream 10.0kb upstream 13384 true Chr11: 19650488-19663871 Eucalyptus grandis
Eucgr.K01672 10.0kb upstream 10.0kb upstream 10000 false Chr11: 19653872-19663871 Eucalyptus grandis
Eucgr.K01672 10.0kb downstream 10.0kb downstream 13384 true Chr11: 19640488-19653871 Eucalyptus grandis
Eucgr.K01672 10.0kb downstream 10.0kb downstream 10000 false Chr11: 19640488-19650487 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067136 5270 Rosid View MSA
123746363 5271 Pentapetalae View MSA
122792796 5272 Eudicot View MSA
122047440 5273 Angiosperm View MSA
121347490 5274 Embryophyte View MSA
123426312 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10532 0.0 5.67009    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.399694 0.0 1.42368    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 18.8811 0.0 42.5061   High

0 Strain