Gene : Eucgr.K01645 E. grandis v2.0
Defline:  (1 of 2) PTHR12917//PTHR12917:SF20 - ASPARTYL PROTEASE DDI-RELATED Genomic Order:  1367
Name:  ? Eucgr.K01645 Secondary Identifier:  ? PAC:32066700
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01645 0.5kb upstream 0.5kb upstream 7023 true Chr11: 19892425-19899447 Eucalyptus grandis
Eucgr.K01645 0.5kb upstream 0.5kb upstream 500 false Chr11: 19898948-19899447 Eucalyptus grandis
Eucgr.K01645 0.5kb downstream 0.5kb downstream 7023 true Chr11: 19891925-19898947 Eucalyptus grandis
Eucgr.K01645 0.5kb downstream 0.5kb downstream 500 false Chr11: 19891925-19892424 Eucalyptus grandis
Eucgr.K01645 1.0kb upstream 1.0kb upstream 7523 true Chr11: 19892425-19899947 Eucalyptus grandis
Eucgr.K01645 1.0kb upstream 1.0kb upstream 1000 false Chr11: 19898948-19899947 Eucalyptus grandis
Eucgr.K01645 1.0kb downstream 1.0kb downstream 7523 true Chr11: 19891425-19898947 Eucalyptus grandis
Eucgr.K01645 1.0kb downstream 1.0kb downstream 1000 false Chr11: 19891425-19892424 Eucalyptus grandis
Eucgr.K01645 2.0kb upstream 2.0kb upstream 8523 true Chr11: 19892425-19900947 Eucalyptus grandis
Eucgr.K01645 2.0kb upstream 2.0kb upstream 2000 false Chr11: 19898948-19900947 Eucalyptus grandis
Eucgr.K01645 2.0kb downstream 2.0kb downstream 8523 true Chr11: 19890425-19898947 Eucalyptus grandis
Eucgr.K01645 2.0kb downstream 2.0kb downstream 2000 false Chr11: 19890425-19892424 Eucalyptus grandis
Eucgr.K01645 5.0kb upstream 5.0kb upstream 11523 true Chr11: 19892425-19903947 Eucalyptus grandis
Eucgr.K01645 5.0kb upstream 5.0kb upstream 5000 false Chr11: 19898948-19903947 Eucalyptus grandis
Eucgr.K01645 5.0kb downstream 5.0kb downstream 11523 true Chr11: 19887425-19898947 Eucalyptus grandis
Eucgr.K01645 5.0kb downstream 5.0kb downstream 5000 false Chr11: 19887425-19892424 Eucalyptus grandis
Eucgr.K01645 10.0kb upstream 10.0kb upstream 16523 true Chr11: 19892425-19908947 Eucalyptus grandis
Eucgr.K01645 10.0kb upstream 10.0kb upstream 10000 false Chr11: 19898948-19908947 Eucalyptus grandis
Eucgr.K01645 10.0kb downstream 10.0kb downstream 16523 true Chr11: 19882425-19898947 Eucalyptus grandis
Eucgr.K01645 10.0kb downstream 10.0kb downstream 10000 false Chr11: 19882425-19892424 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061848 5270 Rosid View MSA
123737894 5271 Pentapetalae View MSA
122788479 5272 Eudicot View MSA
122046571 5273 Angiosperm View MSA
121349564 5274 Embryophyte View MSA
123424365 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3758 0.0 36.3341   High
cufflinks 7.4434 0.0 18.2411    
cufflinks 11.5154 0.0 33.8604    
cufflinks 5.79208 0.0 18.1809    
cufflinks 5.17382 0.0 13.5123   Low
cufflinks 12.6179 0.0 33.3819    

0 Strain