Gene : Eucgr.K01522 E. grandis v2.0
Defline:  (1 of 1) PTHR31529:SF4 - LOB DOMAIN-CONTAINING PROTEIN 14-RELATED Genomic Order:  1269
Name:  ? Eucgr.K01522 Secondary Identifier:  ? PAC:32066012
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01522 0.5kb upstream 0.5kb upstream 2035 true Chr11: 18632526-18634560 Eucalyptus grandis
Eucgr.K01522 0.5kb upstream 0.5kb upstream 500 false Chr11: 18632526-18633025 Eucalyptus grandis
Eucgr.K01522 0.5kb downstream 0.5kb downstream 2035 true Chr11: 18633026-18635060 Eucalyptus grandis
Eucgr.K01522 0.5kb downstream 0.5kb downstream 500 false Chr11: 18634561-18635060 Eucalyptus grandis
Eucgr.K01522 1.0kb upstream 1.0kb upstream 2535 true Chr11: 18632026-18634560 Eucalyptus grandis
Eucgr.K01522 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18632026-18633025 Eucalyptus grandis
Eucgr.K01522 1.0kb downstream 1.0kb downstream 2535 true Chr11: 18633026-18635560 Eucalyptus grandis
Eucgr.K01522 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18634561-18635560 Eucalyptus grandis
Eucgr.K01522 2.0kb upstream 2.0kb upstream 3535 true Chr11: 18631026-18634560 Eucalyptus grandis
Eucgr.K01522 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18631026-18633025 Eucalyptus grandis
Eucgr.K01522 2.0kb downstream 2.0kb downstream 3535 true Chr11: 18633026-18636560 Eucalyptus grandis
Eucgr.K01522 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18634561-18636560 Eucalyptus grandis
Eucgr.K01522 5.0kb upstream 5.0kb upstream 6535 true Chr11: 18628026-18634560 Eucalyptus grandis
Eucgr.K01522 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18628026-18633025 Eucalyptus grandis
Eucgr.K01522 5.0kb downstream 5.0kb downstream 6535 true Chr11: 18633026-18639560 Eucalyptus grandis
Eucgr.K01522 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18634561-18639560 Eucalyptus grandis
Eucgr.K01522 10.0kb upstream 10.0kb upstream 11535 true Chr11: 18623026-18634560 Eucalyptus grandis
Eucgr.K01522 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18623026-18633025 Eucalyptus grandis
Eucgr.K01522 10.0kb downstream 10.0kb downstream 11535 true Chr11: 18633026-18644560 Eucalyptus grandis
Eucgr.K01522 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18634561-18644560 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063003 5270 Rosid View MSA
123738630 5271 Pentapetalae View MSA
122788179 5272 Eudicot View MSA
122045879 5273 Angiosperm View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.3481 0.0 4.36198   Low
cufflinks 3.58396 0.0 10.3629    
cufflinks 3.49074 0.0 9.98035    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain