Gene : Eucgr.K01420 E. grandis v2.0
Defline:  (1 of 1) PTHR24223:SF189 - ABC TRANSPORTER C FAMILY MEMBER 5 Genomic Order:  1192
Name:  ? Eucgr.K01420 Secondary Identifier:  ? PAC:32069193
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K01420 0.5kb upstream 0.5kb upstream 10684 true Chr11: 17556231-17566914 Eucalyptus grandis
Eucgr.K01420 0.5kb upstream 0.5kb upstream 500 false Chr11: 17556231-17556730 Eucalyptus grandis
Eucgr.K01420 0.5kb downstream 0.5kb downstream 10684 true Chr11: 17556731-17567414 Eucalyptus grandis
Eucgr.K01420 0.5kb downstream 0.5kb downstream 500 false Chr11: 17566915-17567414 Eucalyptus grandis
Eucgr.K01420 1.0kb upstream 1.0kb upstream 11184 true Chr11: 17555731-17566914 Eucalyptus grandis
Eucgr.K01420 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17555731-17556730 Eucalyptus grandis
Eucgr.K01420 1.0kb downstream 1.0kb downstream 11184 true Chr11: 17556731-17567914 Eucalyptus grandis
Eucgr.K01420 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17566915-17567914 Eucalyptus grandis
Eucgr.K01420 2.0kb upstream 2.0kb upstream 12184 true Chr11: 17554731-17566914 Eucalyptus grandis
Eucgr.K01420 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17554731-17556730 Eucalyptus grandis
Eucgr.K01420 2.0kb downstream 2.0kb downstream 12184 true Chr11: 17556731-17568914 Eucalyptus grandis
Eucgr.K01420 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17566915-17568914 Eucalyptus grandis
Eucgr.K01420 5.0kb upstream 5.0kb upstream 15184 true Chr11: 17551731-17566914 Eucalyptus grandis
Eucgr.K01420 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17551731-17556730 Eucalyptus grandis
Eucgr.K01420 5.0kb downstream 5.0kb downstream 15184 true Chr11: 17556731-17571914 Eucalyptus grandis
Eucgr.K01420 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17566915-17571914 Eucalyptus grandis
Eucgr.K01420 10.0kb upstream 10.0kb upstream 20184 true Chr11: 17546731-17566914 Eucalyptus grandis
Eucgr.K01420 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17546731-17556730 Eucalyptus grandis
Eucgr.K01420 10.0kb downstream 10.0kb downstream 20184 true Chr11: 17556731-17576914 Eucalyptus grandis
Eucgr.K01420 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17566915-17576914 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062318 5270 Rosid View MSA
123738711 5271 Pentapetalae View MSA
122797524 5272 Eudicot View MSA
122042254 5273 Angiosperm View MSA
121346064 5274 Embryophyte View MSA
123380316 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.004 0.0 86.3252 High  
cufflinks 3.80712 0.0 8.81643   Low
cufflinks 29.2071 0.0 80.704 High  
cufflinks 5.26896 0.0 11.8574    
cufflinks 9.76224 0.0 25.4415    
cufflinks 31.8819 0.0 80.5196    

0 Strain