Gene : Eucgr.K02191 E. grandis v2.0
Defline:  (1 of 1) PTHR11062:SF81 - BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED Genomic Order:  1830
Name:  ? Eucgr.K02191 Secondary Identifier:  ? PAC:32069577
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5980 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02191 0.5kb upstream 0.5kb upstream 3394 true Chr11: 29870352-29873745 Eucalyptus grandis
Eucgr.K02191 0.5kb upstream 0.5kb upstream 500 false Chr11: 29873246-29873745 Eucalyptus grandis
Eucgr.K02191 0.5kb downstream 0.5kb downstream 3394 true Chr11: 29869852-29873245 Eucalyptus grandis
Eucgr.K02191 0.5kb downstream 0.5kb downstream 500 false Chr11: 29869852-29870351 Eucalyptus grandis
Eucgr.K02191 1.0kb upstream 1.0kb upstream 3894 true Chr11: 29870352-29874245 Eucalyptus grandis
Eucgr.K02191 1.0kb upstream 1.0kb upstream 1000 false Chr11: 29873246-29874245 Eucalyptus grandis
Eucgr.K02191 1.0kb downstream 1.0kb downstream 3894 true Chr11: 29869352-29873245 Eucalyptus grandis
Eucgr.K02191 1.0kb downstream 1.0kb downstream 1000 false Chr11: 29869352-29870351 Eucalyptus grandis
Eucgr.K02191 2.0kb upstream 2.0kb upstream 4894 true Chr11: 29870352-29875245 Eucalyptus grandis
Eucgr.K02191 2.0kb upstream 2.0kb upstream 2000 false Chr11: 29873246-29875245 Eucalyptus grandis
Eucgr.K02191 2.0kb downstream 2.0kb downstream 4894 true Chr11: 29868352-29873245 Eucalyptus grandis
Eucgr.K02191 2.0kb downstream 2.0kb downstream 2000 false Chr11: 29868352-29870351 Eucalyptus grandis
Eucgr.K02191 5.0kb upstream 5.0kb upstream 7894 true Chr11: 29870352-29878245 Eucalyptus grandis
Eucgr.K02191 5.0kb upstream 5.0kb upstream 5000 false Chr11: 29873246-29878245 Eucalyptus grandis
Eucgr.K02191 5.0kb downstream 5.0kb downstream 7894 true Chr11: 29865352-29873245 Eucalyptus grandis
Eucgr.K02191 5.0kb downstream 5.0kb downstream 5000 false Chr11: 29865352-29870351 Eucalyptus grandis
Eucgr.K02191 10.0kb upstream 10.0kb upstream 12894 true Chr11: 29870352-29883245 Eucalyptus grandis
Eucgr.K02191 10.0kb upstream 10.0kb upstream 10000 false Chr11: 29873246-29883245 Eucalyptus grandis
Eucgr.K02191 10.0kb downstream 10.0kb downstream 12894 true Chr11: 29860352-29873245 Eucalyptus grandis
Eucgr.K02191 10.0kb downstream 10.0kb downstream 10000 false Chr11: 29860352-29870351 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.41714 0.0 19.7687    
cufflinks 41.1384 0.0 91.1906    
cufflinks 11.3736 0.0 26.0585    
cufflinks 68.645 0.0 154.793 High High
cufflinks 23.8177 0.0 52.8014    
cufflinks 8.80512 0.0 20.6604    

0 Strain