Gene : Eucgr.K02180 E. grandis v2.0
Defline:  (1 of 8) PTHR11941:SF43 - DELTA(3,5)-DELTA(2,4)-DIENOYL-COA ISOMERASE, MITOCHONDRIAL Genomic Order:  1820
Name:  ? Eucgr.K02180 Secondary Identifier:  ? PAC:32067063
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02180 0.5kb upstream 0.5kb upstream 3719 true Chr11: 29750184-29753902 Eucalyptus grandis
Eucgr.K02180 0.5kb upstream 0.5kb upstream 500 false Chr11: 29750184-29750683 Eucalyptus grandis
Eucgr.K02180 0.5kb downstream 0.5kb downstream 3719 true Chr11: 29750684-29754402 Eucalyptus grandis
Eucgr.K02180 0.5kb downstream 0.5kb downstream 500 false Chr11: 29753903-29754402 Eucalyptus grandis
Eucgr.K02180 1.0kb upstream 1.0kb upstream 4219 true Chr11: 29749684-29753902 Eucalyptus grandis
Eucgr.K02180 1.0kb upstream 1.0kb upstream 1000 false Chr11: 29749684-29750683 Eucalyptus grandis
Eucgr.K02180 1.0kb downstream 1.0kb downstream 4219 true Chr11: 29750684-29754902 Eucalyptus grandis
Eucgr.K02180 1.0kb downstream 1.0kb downstream 1000 false Chr11: 29753903-29754902 Eucalyptus grandis
Eucgr.K02180 2.0kb upstream 2.0kb upstream 5219 true Chr11: 29748684-29753902 Eucalyptus grandis
Eucgr.K02180 2.0kb upstream 2.0kb upstream 2000 false Chr11: 29748684-29750683 Eucalyptus grandis
Eucgr.K02180 2.0kb downstream 2.0kb downstream 5219 true Chr11: 29750684-29755902 Eucalyptus grandis
Eucgr.K02180 2.0kb downstream 2.0kb downstream 2000 false Chr11: 29753903-29755902 Eucalyptus grandis
Eucgr.K02180 5.0kb upstream 5.0kb upstream 8219 true Chr11: 29745684-29753902 Eucalyptus grandis
Eucgr.K02180 5.0kb upstream 5.0kb upstream 5000 false Chr11: 29745684-29750683 Eucalyptus grandis
Eucgr.K02180 5.0kb downstream 5.0kb downstream 8219 true Chr11: 29750684-29758902 Eucalyptus grandis
Eucgr.K02180 5.0kb downstream 5.0kb downstream 5000 false Chr11: 29753903-29758902 Eucalyptus grandis
Eucgr.K02180 10.0kb upstream 10.0kb upstream 13219 true Chr11: 29740684-29753902 Eucalyptus grandis
Eucgr.K02180 10.0kb upstream 10.0kb upstream 10000 false Chr11: 29740684-29750683 Eucalyptus grandis
Eucgr.K02180 10.0kb downstream 10.0kb downstream 13219 true Chr11: 29750684-29763902 Eucalyptus grandis
Eucgr.K02180 10.0kb downstream 10.0kb downstream 10000 false Chr11: 29753903-29763902 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062067 5270 Rosid View MSA
123740609 5271 Pentapetalae View MSA
122793404 5272 Eudicot View MSA
122044644 5273 Angiosperm View MSA
121346974 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.94879 0.0 13.1175   Low
cufflinks 15.0152 0.0 36.0223    
cufflinks 8.50113 0.0 21.579    
cufflinks 16.2271 0.0 38.7506    
cufflinks 9.69035 0.0 24.2553    
cufflinks 14.9153 0.0 35.1124    

0 Strain