Gene : Eucgr.K02720 E. grandis v2.0
Defline:  (1 of 6) 2.2.1.6 - Acetolactate synthase / Alpha-acetolactate synthetase Genomic Order:  2235
Name:  ? Eucgr.K02720 Secondary Identifier:  ? PAC:32066004
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis BRANCHED-CHAIN-AA-SYN-PWY Eucalyptus grandis pathologic  
Egrandis ILEUSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3001 Eucalyptus grandis pathologic  
Egrandis VALSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02720 0.5kb upstream 0.5kb upstream 3132 true Chr11: 34771183-34774314 Eucalyptus grandis
Eucgr.K02720 0.5kb upstream 0.5kb upstream 500 false Chr11: 34771183-34771682 Eucalyptus grandis
Eucgr.K02720 0.5kb downstream 0.5kb downstream 3132 true Chr11: 34771683-34774814 Eucalyptus grandis
Eucgr.K02720 0.5kb downstream 0.5kb downstream 500 false Chr11: 34774315-34774814 Eucalyptus grandis
Eucgr.K02720 1.0kb upstream 1.0kb upstream 3632 true Chr11: 34770683-34774314 Eucalyptus grandis
Eucgr.K02720 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34770683-34771682 Eucalyptus grandis
Eucgr.K02720 1.0kb downstream 1.0kb downstream 3632 true Chr11: 34771683-34775314 Eucalyptus grandis
Eucgr.K02720 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34774315-34775314 Eucalyptus grandis
Eucgr.K02720 2.0kb upstream 2.0kb upstream 4632 true Chr11: 34769683-34774314 Eucalyptus grandis
Eucgr.K02720 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34769683-34771682 Eucalyptus grandis
Eucgr.K02720 2.0kb downstream 2.0kb downstream 4632 true Chr11: 34771683-34776314 Eucalyptus grandis
Eucgr.K02720 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34774315-34776314 Eucalyptus grandis
Eucgr.K02720 5.0kb upstream 5.0kb upstream 7632 true Chr11: 34766683-34774314 Eucalyptus grandis
Eucgr.K02720 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34766683-34771682 Eucalyptus grandis
Eucgr.K02720 5.0kb downstream 5.0kb downstream 7632 true Chr11: 34771683-34779314 Eucalyptus grandis
Eucgr.K02720 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34774315-34779314 Eucalyptus grandis
Eucgr.K02720 10.0kb upstream 10.0kb upstream 12632 true Chr11: 34761683-34774314 Eucalyptus grandis
Eucgr.K02720 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34761683-34771682 Eucalyptus grandis
Eucgr.K02720 10.0kb downstream 10.0kb downstream 12632 true Chr11: 34771683-34784314 Eucalyptus grandis
Eucgr.K02720 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34774315-34784314 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061754 5270 Rosid View MSA
123740157 5271 Pentapetalae View MSA
122787294 5272 Eudicot View MSA
122042643 5273 Angiosperm View MSA
121346996 5274 Embryophyte View MSA
123424213 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.44333 0.0 17.1519    
cufflinks 8.1501 0.0 18.6485    
cufflinks 9.42549 0.0 21.2967    
cufflinks 6.49169 0.0 15.0774    
cufflinks 8.9235 0.0 20.207    
cufflinks 4.17227 0.0 10.1013   Low

0 Strain