Gene : Eucgr.K02713 E. grandis v2.0
Defline:  (1 of 3) PTHR31956:SF2 - NON-SPECIFIC PHOSPHOLIPASE C6 Genomic Order:  2228
Name:  ? Eucgr.K02713 Secondary Identifier:  ? PAC:32067763
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPASYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02713 0.5kb upstream 0.5kb upstream 3220 true Chr11: 34659767-34662986 Eucalyptus grandis
Eucgr.K02713 0.5kb upstream 0.5kb upstream 500 false Chr11: 34659767-34660266 Eucalyptus grandis
Eucgr.K02713 0.5kb downstream 0.5kb downstream 3220 true Chr11: 34660267-34663486 Eucalyptus grandis
Eucgr.K02713 0.5kb downstream 0.5kb downstream 500 false Chr11: 34662987-34663486 Eucalyptus grandis
Eucgr.K02713 1.0kb upstream 1.0kb upstream 3720 true Chr11: 34659267-34662986 Eucalyptus grandis
Eucgr.K02713 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34659267-34660266 Eucalyptus grandis
Eucgr.K02713 1.0kb downstream 1.0kb downstream 3720 true Chr11: 34660267-34663986 Eucalyptus grandis
Eucgr.K02713 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34662987-34663986 Eucalyptus grandis
Eucgr.K02713 2.0kb upstream 2.0kb upstream 4720 true Chr11: 34658267-34662986 Eucalyptus grandis
Eucgr.K02713 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34658267-34660266 Eucalyptus grandis
Eucgr.K02713 2.0kb downstream 2.0kb downstream 4720 true Chr11: 34660267-34664986 Eucalyptus grandis
Eucgr.K02713 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34662987-34664986 Eucalyptus grandis
Eucgr.K02713 5.0kb upstream 5.0kb upstream 7720 true Chr11: 34655267-34662986 Eucalyptus grandis
Eucgr.K02713 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34655267-34660266 Eucalyptus grandis
Eucgr.K02713 5.0kb downstream 5.0kb downstream 7720 true Chr11: 34660267-34667986 Eucalyptus grandis
Eucgr.K02713 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34662987-34667986 Eucalyptus grandis
Eucgr.K02713 10.0kb upstream 10.0kb upstream 12720 true Chr11: 34650267-34662986 Eucalyptus grandis
Eucgr.K02713 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34650267-34660266 Eucalyptus grandis
Eucgr.K02713 10.0kb downstream 10.0kb downstream 12720 true Chr11: 34660267-34672986 Eucalyptus grandis
Eucgr.K02713 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34662987-34672986 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067209 5270 Rosid View MSA
123741370 5271 Pentapetalae View MSA
122788110 5272 Eudicot View MSA
122046381 5273 Angiosperm View MSA
121310596 5274 Embryophyte View MSA
123348041 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.1025 0.0 3.38489    
cufflinks 1.55988 0.0 4.40436    
cufflinks 2.77918 0.0 7.31791    
cufflinks 2.9117 0.0 7.59964    
cufflinks 11.4919 0.0 26.6611   High
cufflinks 0.661281 0.0 2.25275 Low Low

0 Strain