Gene : Eucgr.K02692 E. grandis v2.0
Defline:  (1 of 7) 5.4.99.28 - tRNA pseudouridine(32) synthase / Pseudouridine synthase RluA Genomic Order:  2209
Name:  ? Eucgr.K02692 Secondary Identifier:  ? PAC:32065918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02692 0.5kb upstream 0.5kb upstream 6127 true Chr11: 34430901-34437027 Eucalyptus grandis
Eucgr.K02692 0.5kb upstream 0.5kb upstream 500 false Chr11: 34436528-34437027 Eucalyptus grandis
Eucgr.K02692 0.5kb downstream 0.5kb downstream 6127 true Chr11: 34430401-34436527 Eucalyptus grandis
Eucgr.K02692 0.5kb downstream 0.5kb downstream 500 false Chr11: 34430401-34430900 Eucalyptus grandis
Eucgr.K02692 1.0kb upstream 1.0kb upstream 6627 true Chr11: 34430901-34437527 Eucalyptus grandis
Eucgr.K02692 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34436528-34437527 Eucalyptus grandis
Eucgr.K02692 1.0kb downstream 1.0kb downstream 6627 true Chr11: 34429901-34436527 Eucalyptus grandis
Eucgr.K02692 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34429901-34430900 Eucalyptus grandis
Eucgr.K02692 2.0kb upstream 2.0kb upstream 7627 true Chr11: 34430901-34438527 Eucalyptus grandis
Eucgr.K02692 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34436528-34438527 Eucalyptus grandis
Eucgr.K02692 2.0kb downstream 2.0kb downstream 7627 true Chr11: 34428901-34436527 Eucalyptus grandis
Eucgr.K02692 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34428901-34430900 Eucalyptus grandis
Eucgr.K02692 5.0kb upstream 5.0kb upstream 10627 true Chr11: 34430901-34441527 Eucalyptus grandis
Eucgr.K02692 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34436528-34441527 Eucalyptus grandis
Eucgr.K02692 5.0kb downstream 5.0kb downstream 10627 true Chr11: 34425901-34436527 Eucalyptus grandis
Eucgr.K02692 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34425901-34430900 Eucalyptus grandis
Eucgr.K02692 10.0kb upstream 10.0kb upstream 15627 true Chr11: 34430901-34446527 Eucalyptus grandis
Eucgr.K02692 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34436528-34446527 Eucalyptus grandis
Eucgr.K02692 10.0kb downstream 10.0kb downstream 15627 true Chr11: 34420901-34436527 Eucalyptus grandis
Eucgr.K02692 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34420901-34430900 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064384 5270 Rosid View MSA
123747081 5271 Pentapetalae View MSA
122790288 5272 Eudicot View MSA
122047695 5273 Angiosperm View MSA
121349064 5274 Embryophyte View MSA
123426945 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.75535 0.0 14.1076    
cufflinks 10.2261 0.0 27.584   High
cufflinks 4.92769 0.0 12.2822    
cufflinks 8.61343 0.0 23.504    
cufflinks 6.76236 0.0 19.0122    
cufflinks 3.36697 0.0 8.88457   Low

0 Strain