Gene : Eucgr.K02707 E. grandis v2.0
Defline:  (1 of 1) KOG2014 - SMT3/SUMO-activating complex, AOS1/RAD31 component Genomic Order:  2222
Name:  ? Eucgr.K02707 Secondary Identifier:  ? PAC:32067882
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02707 0.5kb upstream 0.5kb upstream 4106 true Chr11: 34619047-34623152 Eucalyptus grandis
Eucgr.K02707 0.5kb upstream 0.5kb upstream 500 false Chr11: 34622653-34623152 Eucalyptus grandis
Eucgr.K02707 0.5kb downstream 0.5kb downstream 4106 true Chr11: 34618547-34622652 Eucalyptus grandis
Eucgr.K02707 0.5kb downstream 0.5kb downstream 500 false Chr11: 34618547-34619046 Eucalyptus grandis
Eucgr.K02707 1.0kb upstream 1.0kb upstream 4606 true Chr11: 34619047-34623652 Eucalyptus grandis
Eucgr.K02707 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34622653-34623652 Eucalyptus grandis
Eucgr.K02707 1.0kb downstream 1.0kb downstream 4606 true Chr11: 34618047-34622652 Eucalyptus grandis
Eucgr.K02707 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34618047-34619046 Eucalyptus grandis
Eucgr.K02707 2.0kb upstream 2.0kb upstream 5606 true Chr11: 34619047-34624652 Eucalyptus grandis
Eucgr.K02707 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34622653-34624652 Eucalyptus grandis
Eucgr.K02707 2.0kb downstream 2.0kb downstream 5606 true Chr11: 34617047-34622652 Eucalyptus grandis
Eucgr.K02707 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34617047-34619046 Eucalyptus grandis
Eucgr.K02707 5.0kb upstream 5.0kb upstream 8606 true Chr11: 34619047-34627652 Eucalyptus grandis
Eucgr.K02707 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34622653-34627652 Eucalyptus grandis
Eucgr.K02707 5.0kb downstream 5.0kb downstream 8606 true Chr11: 34614047-34622652 Eucalyptus grandis
Eucgr.K02707 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34614047-34619046 Eucalyptus grandis
Eucgr.K02707 10.0kb upstream 10.0kb upstream 13606 true Chr11: 34619047-34632652 Eucalyptus grandis
Eucgr.K02707 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34622653-34632652 Eucalyptus grandis
Eucgr.K02707 10.0kb downstream 10.0kb downstream 13606 true Chr11: 34609047-34622652 Eucalyptus grandis
Eucgr.K02707 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34609047-34619046 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041218 5273 Angiosperm View MSA
124063789 5270 Rosid View MSA
123737552 5271 Pentapetalae View MSA
122790997 5272 Eudicot View MSA
121348552 5274 Embryophyte View MSA
123424130 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.7724 0.0 67.0075 High High
cufflinks 16.1333 0.0 37.0957    
cufflinks 29.8356 0.0 66.8434 High High
cufflinks 15.9495 0.0 36.3758    
cufflinks 18.658 0.0 42.7547    
cufflinks 20.4482 0.0 46.6827    

0 Strain