Gene : Eucgr.K02620 E. grandis v2.0
Defline:  (1 of 1) PTHR12642:SF0 - RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG Genomic Order:  1629
Name:  ? Eucgr.K02620 Secondary Identifier:  ? PAC:32068386
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02620 0.5kb upstream 0.5kb upstream 3702 true Chr11: 25797832-25801533 Eucalyptus grandis
Eucgr.K02620 0.5kb upstream 0.5kb upstream 500 false Chr11: 25801034-25801533 Eucalyptus grandis
Eucgr.K02620 0.5kb downstream 0.5kb downstream 3702 true Chr11: 25797332-25801033 Eucalyptus grandis
Eucgr.K02620 0.5kb downstream 0.5kb downstream 500 false Chr11: 25797332-25797831 Eucalyptus grandis
Eucgr.K02620 1.0kb upstream 1.0kb upstream 4202 true Chr11: 25797832-25802033 Eucalyptus grandis
Eucgr.K02620 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25801034-25802033 Eucalyptus grandis
Eucgr.K02620 1.0kb downstream 1.0kb downstream 4202 true Chr11: 25796832-25801033 Eucalyptus grandis
Eucgr.K02620 1.0kb downstream 1.0kb downstream 1000 false Chr11: 25796832-25797831 Eucalyptus grandis
Eucgr.K02620 2.0kb upstream 2.0kb upstream 5202 true Chr11: 25797832-25803033 Eucalyptus grandis
Eucgr.K02620 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25801034-25803033 Eucalyptus grandis
Eucgr.K02620 2.0kb downstream 2.0kb downstream 5202 true Chr11: 25795832-25801033 Eucalyptus grandis
Eucgr.K02620 2.0kb downstream 2.0kb downstream 2000 false Chr11: 25795832-25797831 Eucalyptus grandis
Eucgr.K02620 5.0kb upstream 5.0kb upstream 8202 true Chr11: 25797832-25806033 Eucalyptus grandis
Eucgr.K02620 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25801034-25806033 Eucalyptus grandis
Eucgr.K02620 5.0kb downstream 5.0kb downstream 8202 true Chr11: 25792832-25801033 Eucalyptus grandis
Eucgr.K02620 5.0kb downstream 5.0kb downstream 5000 false Chr11: 25792832-25797831 Eucalyptus grandis
Eucgr.K02620 10.0kb upstream 10.0kb upstream 13202 true Chr11: 25797832-25811033 Eucalyptus grandis
Eucgr.K02620 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25801034-25811033 Eucalyptus grandis
Eucgr.K02620 10.0kb downstream 10.0kb downstream 13202 true Chr11: 25787832-25801033 Eucalyptus grandis
Eucgr.K02620 10.0kb downstream 10.0kb downstream 10000 false Chr11: 25787832-25797831 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061580 5270 Rosid View MSA
123741663 5271 Pentapetalae View MSA
122796329 5272 Eudicot View MSA
122043464 5273 Angiosperm View MSA
121344863 5274 Embryophyte View MSA
123424224 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.275 0.0 60.7158    
cufflinks 12.167 0.0 28.339   Low
cufflinks 24.4032 0.0 54.4876    
cufflinks 21.0692 0.0 47.3031    
cufflinks 16.2221 0.0 37.0289    
cufflinks 29.5052 0.0 65.6187   High

0 Strain