Gene : Eucgr.K02458 E. grandis v2.0
Defline:  (1 of 3) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA Genomic Order:  2067
Name:  ? Eucgr.K02458 Secondary Identifier:  ? PAC:32069428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02458 0.5kb upstream 0.5kb upstream 9966 true Chr11: 32670712-32680677 Eucalyptus grandis
Eucgr.K02458 0.5kb upstream 0.5kb upstream 500 false Chr11: 32670712-32671211 Eucalyptus grandis
Eucgr.K02458 0.5kb downstream 0.5kb downstream 9966 true Chr11: 32671212-32681177 Eucalyptus grandis
Eucgr.K02458 0.5kb downstream 0.5kb downstream 500 false Chr11: 32680678-32681177 Eucalyptus grandis
Eucgr.K02458 1.0kb upstream 1.0kb upstream 10466 true Chr11: 32670212-32680677 Eucalyptus grandis
Eucgr.K02458 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32670212-32671211 Eucalyptus grandis
Eucgr.K02458 1.0kb downstream 1.0kb downstream 10466 true Chr11: 32671212-32681677 Eucalyptus grandis
Eucgr.K02458 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32680678-32681677 Eucalyptus grandis
Eucgr.K02458 2.0kb upstream 2.0kb upstream 11466 true Chr11: 32669212-32680677 Eucalyptus grandis
Eucgr.K02458 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32669212-32671211 Eucalyptus grandis
Eucgr.K02458 2.0kb downstream 2.0kb downstream 11466 true Chr11: 32671212-32682677 Eucalyptus grandis
Eucgr.K02458 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32680678-32682677 Eucalyptus grandis
Eucgr.K02458 5.0kb upstream 5.0kb upstream 14466 true Chr11: 32666212-32680677 Eucalyptus grandis
Eucgr.K02458 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32666212-32671211 Eucalyptus grandis
Eucgr.K02458 5.0kb downstream 5.0kb downstream 14466 true Chr11: 32671212-32685677 Eucalyptus grandis
Eucgr.K02458 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32680678-32685677 Eucalyptus grandis
Eucgr.K02458 10.0kb upstream 10.0kb upstream 19466 true Chr11: 32661212-32680677 Eucalyptus grandis
Eucgr.K02458 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32661212-32671211 Eucalyptus grandis
Eucgr.K02458 10.0kb downstream 10.0kb downstream 19466 true Chr11: 32671212-32690677 Eucalyptus grandis
Eucgr.K02458 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32680678-32690677 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041021 5273 Angiosperm View MSA
124064975 5270 Rosid View MSA
123738851 5271 Pentapetalae View MSA
122789582 5272 Eudicot View MSA
123429075 5275 Viridiplantae View MSA
121349830 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.72847 0.0 8.80951   Low
cufflinks 10.5774 0.0 23.4709    
cufflinks 39.1718 0.0 89.3946    
cufflinks 5.06558 0.0 11.6257    
cufflinks 87.6279 0.0 215.071 High High
cufflinks 7.01633 0.0 15.8772    

0 Strain