Gene : Eucgr.K02416 E. grandis v2.0
Defline:  (1 of 2) PTHR21737:SF4 - CACTIN Genomic Order:  2030
Name:  ? Eucgr.K02416 Secondary Identifier:  ? PAC:32069314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02416 0.5kb upstream 0.5kb upstream 7513 true Chr11: 32205879-32213391 Eucalyptus grandis
Eucgr.K02416 0.5kb upstream 0.5kb upstream 500 false Chr11: 32212892-32213391 Eucalyptus grandis
Eucgr.K02416 0.5kb downstream 0.5kb downstream 7513 true Chr11: 32205379-32212891 Eucalyptus grandis
Eucgr.K02416 0.5kb downstream 0.5kb downstream 500 false Chr11: 32205379-32205878 Eucalyptus grandis
Eucgr.K02416 1.0kb upstream 1.0kb upstream 8013 true Chr11: 32205879-32213891 Eucalyptus grandis
Eucgr.K02416 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32212892-32213891 Eucalyptus grandis
Eucgr.K02416 1.0kb downstream 1.0kb downstream 8013 true Chr11: 32204879-32212891 Eucalyptus grandis
Eucgr.K02416 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32204879-32205878 Eucalyptus grandis
Eucgr.K02416 2.0kb upstream 2.0kb upstream 9013 true Chr11: 32205879-32214891 Eucalyptus grandis
Eucgr.K02416 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32212892-32214891 Eucalyptus grandis
Eucgr.K02416 2.0kb downstream 2.0kb downstream 9013 true Chr11: 32203879-32212891 Eucalyptus grandis
Eucgr.K02416 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32203879-32205878 Eucalyptus grandis
Eucgr.K02416 5.0kb upstream 5.0kb upstream 12013 true Chr11: 32205879-32217891 Eucalyptus grandis
Eucgr.K02416 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32212892-32217891 Eucalyptus grandis
Eucgr.K02416 5.0kb downstream 5.0kb downstream 12013 true Chr11: 32200879-32212891 Eucalyptus grandis
Eucgr.K02416 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32200879-32205878 Eucalyptus grandis
Eucgr.K02416 10.0kb upstream 10.0kb upstream 17013 true Chr11: 32205879-32222891 Eucalyptus grandis
Eucgr.K02416 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32212892-32222891 Eucalyptus grandis
Eucgr.K02416 10.0kb downstream 10.0kb downstream 17013 true Chr11: 32195879-32212891 Eucalyptus grandis
Eucgr.K02416 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32195879-32205878 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062313 5270 Rosid View MSA
123746898 5271 Pentapetalae View MSA
122792655 5272 Eudicot View MSA
122043327 5273 Angiosperm View MSA
121346365 5274 Embryophyte View MSA
123428349 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0826 0.0 22.498    
cufflinks 5.58795 0.0 12.8843   Low
cufflinks 9.52812 0.0 21.2881    
cufflinks 6.94747 0.0 15.7411    
cufflinks 8.92627 0.0 20.0136    
cufflinks 10.1898 0.0 22.733    

0 Strain