Gene : Eucgr.K02861 E. grandis v2.0
Defline:  (1 of 1) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 Genomic Order:  2363
Name:  ? Eucgr.K02861 Secondary Identifier:  ? PAC:32068524
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02861 0.5kb upstream 0.5kb upstream 5564 true Chr11: 35921949-35927512 Eucalyptus grandis
Eucgr.K02861 0.5kb upstream 0.5kb upstream 500 false Chr11: 35927013-35927512 Eucalyptus grandis
Eucgr.K02861 0.5kb downstream 0.5kb downstream 5564 true Chr11: 35921449-35927012 Eucalyptus grandis
Eucgr.K02861 0.5kb downstream 0.5kb downstream 500 false Chr11: 35921449-35921948 Eucalyptus grandis
Eucgr.K02861 1.0kb upstream 1.0kb upstream 6064 true Chr11: 35921949-35928012 Eucalyptus grandis
Eucgr.K02861 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35927013-35928012 Eucalyptus grandis
Eucgr.K02861 1.0kb downstream 1.0kb downstream 6064 true Chr11: 35920949-35927012 Eucalyptus grandis
Eucgr.K02861 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35920949-35921948 Eucalyptus grandis
Eucgr.K02861 2.0kb upstream 2.0kb upstream 7064 true Chr11: 35921949-35929012 Eucalyptus grandis
Eucgr.K02861 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35927013-35929012 Eucalyptus grandis
Eucgr.K02861 2.0kb downstream 2.0kb downstream 7064 true Chr11: 35919949-35927012 Eucalyptus grandis
Eucgr.K02861 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35919949-35921948 Eucalyptus grandis
Eucgr.K02861 5.0kb upstream 5.0kb upstream 10064 true Chr11: 35921949-35932012 Eucalyptus grandis
Eucgr.K02861 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35927013-35932012 Eucalyptus grandis
Eucgr.K02861 5.0kb downstream 5.0kb downstream 10064 true Chr11: 35916949-35927012 Eucalyptus grandis
Eucgr.K02861 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35916949-35921948 Eucalyptus grandis
Eucgr.K02861 10.0kb upstream 10.0kb upstream 15064 true Chr11: 35921949-35937012 Eucalyptus grandis
Eucgr.K02861 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35927013-35937012 Eucalyptus grandis
Eucgr.K02861 10.0kb downstream 10.0kb downstream 15064 true Chr11: 35911949-35927012 Eucalyptus grandis
Eucgr.K02861 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35911949-35921948 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065042 5270 Rosid View MSA
123747025 5271 Pentapetalae View MSA
122788970 5272 Eudicot View MSA
122044390 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.55055 0.0 16.9096    
cufflinks 8.06768 0.0 18.0174    
cufflinks 9.16587 0.0 20.3921    
cufflinks 5.73151 0.0 13.0009   Low
cufflinks 9.45724 0.0 21.0219   High
cufflinks 6.31647 0.0 14.2656    

0 Strain