Gene : Eucgr.K02807 E. grandis v2.0
Defline:  (1 of 1) PTHR10625:SF109 - HISTONE DEACETYLASE 2 Genomic Order:  2314
Name:  ? Eucgr.K02807 Secondary Identifier:  ? PAC:32066542
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02807 0.5kb upstream 0.5kb upstream 5796 true Chr11: 35429255-35435050 Eucalyptus grandis
Eucgr.K02807 0.5kb upstream 0.5kb upstream 500 false Chr11: 35429255-35429754 Eucalyptus grandis
Eucgr.K02807 0.5kb downstream 0.5kb downstream 5796 true Chr11: 35429755-35435550 Eucalyptus grandis
Eucgr.K02807 0.5kb downstream 0.5kb downstream 500 false Chr11: 35435051-35435550 Eucalyptus grandis
Eucgr.K02807 1.0kb upstream 1.0kb upstream 6296 true Chr11: 35428755-35435050 Eucalyptus grandis
Eucgr.K02807 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35428755-35429754 Eucalyptus grandis
Eucgr.K02807 1.0kb downstream 1.0kb downstream 6296 true Chr11: 35429755-35436050 Eucalyptus grandis
Eucgr.K02807 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35435051-35436050 Eucalyptus grandis
Eucgr.K02807 2.0kb upstream 2.0kb upstream 7296 true Chr11: 35427755-35435050 Eucalyptus grandis
Eucgr.K02807 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35427755-35429754 Eucalyptus grandis
Eucgr.K02807 2.0kb downstream 2.0kb downstream 7296 true Chr11: 35429755-35437050 Eucalyptus grandis
Eucgr.K02807 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35435051-35437050 Eucalyptus grandis
Eucgr.K02807 5.0kb upstream 5.0kb upstream 10296 true Chr11: 35424755-35435050 Eucalyptus grandis
Eucgr.K02807 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35424755-35429754 Eucalyptus grandis
Eucgr.K02807 5.0kb downstream 5.0kb downstream 10296 true Chr11: 35429755-35440050 Eucalyptus grandis
Eucgr.K02807 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35435051-35440050 Eucalyptus grandis
Eucgr.K02807 10.0kb upstream 10.0kb upstream 15296 true Chr11: 35419755-35435050 Eucalyptus grandis
Eucgr.K02807 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35419755-35429754 Eucalyptus grandis
Eucgr.K02807 10.0kb downstream 10.0kb downstream 15296 true Chr11: 35429755-35445050 Eucalyptus grandis
Eucgr.K02807 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35435051-35445050 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068435 5270 Rosid View MSA
123739181 5271 Pentapetalae View MSA
122793784 5272 Eudicot View MSA
122043471 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9863 0.0 36.4938    
cufflinks 15.6876 0.0 35.7083    
cufflinks 16.5169 0.0 37.5618    
cufflinks 12.1033 0.0 28.1813    
cufflinks 10.4638 0.0 24.9706   Low
cufflinks 15.9498 0.0 36.3319    

0 Strain