Gene : Eucgr.K02812 E. grandis v2.0
Defline:  (1 of 5) PF07223 - Protein of unknown function (DUF1421) (DUF1421) Genomic Order:  2318
Name:  ? Eucgr.K02812 Secondary Identifier:  ? PAC:32067613
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K02812 0.5kb upstream 0.5kb upstream 4147 true Chr11: 35463107-35467253 Eucalyptus grandis
Eucgr.K02812 0.5kb upstream 0.5kb upstream 500 false Chr11: 35466754-35467253 Eucalyptus grandis
Eucgr.K02812 0.5kb downstream 0.5kb downstream 4147 true Chr11: 35462607-35466753 Eucalyptus grandis
Eucgr.K02812 0.5kb downstream 0.5kb downstream 500 false Chr11: 35462607-35463106 Eucalyptus grandis
Eucgr.K02812 1.0kb upstream 1.0kb upstream 4647 true Chr11: 35463107-35467753 Eucalyptus grandis
Eucgr.K02812 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35466754-35467753 Eucalyptus grandis
Eucgr.K02812 1.0kb downstream 1.0kb downstream 4647 true Chr11: 35462107-35466753 Eucalyptus grandis
Eucgr.K02812 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35462107-35463106 Eucalyptus grandis
Eucgr.K02812 2.0kb upstream 2.0kb upstream 5647 true Chr11: 35463107-35468753 Eucalyptus grandis
Eucgr.K02812 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35466754-35468753 Eucalyptus grandis
Eucgr.K02812 2.0kb downstream 2.0kb downstream 5647 true Chr11: 35461107-35466753 Eucalyptus grandis
Eucgr.K02812 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35461107-35463106 Eucalyptus grandis
Eucgr.K02812 5.0kb upstream 5.0kb upstream 8647 true Chr11: 35463107-35471753 Eucalyptus grandis
Eucgr.K02812 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35466754-35471753 Eucalyptus grandis
Eucgr.K02812 5.0kb downstream 5.0kb downstream 8647 true Chr11: 35458107-35466753 Eucalyptus grandis
Eucgr.K02812 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35458107-35463106 Eucalyptus grandis
Eucgr.K02812 10.0kb upstream 10.0kb upstream 13647 true Chr11: 35463107-35476753 Eucalyptus grandis
Eucgr.K02812 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35466754-35476753 Eucalyptus grandis
Eucgr.K02812 10.0kb downstream 10.0kb downstream 13647 true Chr11: 35453107-35466753 Eucalyptus grandis
Eucgr.K02812 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35453107-35463106 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072607 5270 Rosid View MSA
123737243 5271 Pentapetalae View MSA
122792477 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.6048 0.0 34.6884   Low
cufflinks 56.9104 0.0 128.838 High High
cufflinks 21.7888 0.0 48.2008    
cufflinks 27.6129 0.0 61.0935    
cufflinks 44.821 0.0 100.464 High  
cufflinks 34.4488 0.0 76.552 High  

0 Strain