Gene : Eucgr.K03390 E. grandis v2.0
Defline:  (1 of 1) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  2829
Name:  ? Eucgr.K03390 Secondary Identifier:  ? PAC:32068634
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03390 0.5kb upstream 0.5kb upstream 14253 true Chr11: 42104899-42119151 Eucalyptus grandis
Eucgr.K03390 0.5kb upstream 0.5kb upstream 500 false Chr11: 42118652-42119151 Eucalyptus grandis
Eucgr.K03390 0.5kb downstream 0.5kb downstream 14253 true Chr11: 42104399-42118651 Eucalyptus grandis
Eucgr.K03390 0.5kb downstream 0.5kb downstream 500 false Chr11: 42104399-42104898 Eucalyptus grandis
Eucgr.K03390 1.0kb upstream 1.0kb upstream 14753 true Chr11: 42104899-42119651 Eucalyptus grandis
Eucgr.K03390 1.0kb upstream 1.0kb upstream 1000 false Chr11: 42118652-42119651 Eucalyptus grandis
Eucgr.K03390 1.0kb downstream 1.0kb downstream 14753 true Chr11: 42103899-42118651 Eucalyptus grandis
Eucgr.K03390 1.0kb downstream 1.0kb downstream 1000 false Chr11: 42103899-42104898 Eucalyptus grandis
Eucgr.K03390 2.0kb upstream 2.0kb upstream 15753 true Chr11: 42104899-42120651 Eucalyptus grandis
Eucgr.K03390 2.0kb upstream 2.0kb upstream 2000 false Chr11: 42118652-42120651 Eucalyptus grandis
Eucgr.K03390 2.0kb downstream 2.0kb downstream 15753 true Chr11: 42102899-42118651 Eucalyptus grandis
Eucgr.K03390 2.0kb downstream 2.0kb downstream 2000 false Chr11: 42102899-42104898 Eucalyptus grandis
Eucgr.K03390 5.0kb upstream 5.0kb upstream 18753 true Chr11: 42104899-42123651 Eucalyptus grandis
Eucgr.K03390 5.0kb upstream 5.0kb upstream 5000 false Chr11: 42118652-42123651 Eucalyptus grandis
Eucgr.K03390 5.0kb downstream 5.0kb downstream 18753 true Chr11: 42099899-42118651 Eucalyptus grandis
Eucgr.K03390 5.0kb downstream 5.0kb downstream 5000 false Chr11: 42099899-42104898 Eucalyptus grandis
Eucgr.K03390 10.0kb upstream 10.0kb upstream 23753 true Chr11: 42104899-42128651 Eucalyptus grandis
Eucgr.K03390 10.0kb upstream 10.0kb upstream 10000 false Chr11: 42118652-42128651 Eucalyptus grandis
Eucgr.K03390 10.0kb downstream 10.0kb downstream 23753 true Chr11: 42094899-42118651 Eucalyptus grandis
Eucgr.K03390 10.0kb downstream 10.0kb downstream 10000 false Chr11: 42094899-42104898 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1666 0.0 38.3563    
cufflinks 9.89737 0.0 21.892   Low
cufflinks 16.3189 0.0 36.4409    
cufflinks 12.8332 0.0 28.488    
cufflinks 9.64925 0.0 21.3395   Low
cufflinks 18.7676 0.0 42.0175   High

0 Strain