Gene : Eucgr.K03308 E. grandis v2.0
Defline:  (1 of 1) PTHR13683:SF296 - ASPARTYL PROTEASE FAMILY PROTEIN Genomic Order:  2758
Name:  ? Eucgr.K03308 Secondary Identifier:  ? PAC:32066538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03308 0.5kb upstream 0.5kb upstream 4298 true Chr11: 41449778-41454075 Eucalyptus grandis
Eucgr.K03308 0.5kb upstream 0.5kb upstream 500 false Chr11: 41449778-41450277 Eucalyptus grandis
Eucgr.K03308 0.5kb downstream 0.5kb downstream 4298 true Chr11: 41450278-41454575 Eucalyptus grandis
Eucgr.K03308 0.5kb downstream 0.5kb downstream 500 false Chr11: 41454076-41454575 Eucalyptus grandis
Eucgr.K03308 1.0kb upstream 1.0kb upstream 4798 true Chr11: 41449278-41454075 Eucalyptus grandis
Eucgr.K03308 1.0kb upstream 1.0kb upstream 1000 false Chr11: 41449278-41450277 Eucalyptus grandis
Eucgr.K03308 1.0kb downstream 1.0kb downstream 4798 true Chr11: 41450278-41455075 Eucalyptus grandis
Eucgr.K03308 1.0kb downstream 1.0kb downstream 1000 false Chr11: 41454076-41455075 Eucalyptus grandis
Eucgr.K03308 2.0kb upstream 2.0kb upstream 5798 true Chr11: 41448278-41454075 Eucalyptus grandis
Eucgr.K03308 2.0kb upstream 2.0kb upstream 2000 false Chr11: 41448278-41450277 Eucalyptus grandis
Eucgr.K03308 2.0kb downstream 2.0kb downstream 5798 true Chr11: 41450278-41456075 Eucalyptus grandis
Eucgr.K03308 2.0kb downstream 2.0kb downstream 2000 false Chr11: 41454076-41456075 Eucalyptus grandis
Eucgr.K03308 5.0kb upstream 5.0kb upstream 8798 true Chr11: 41445278-41454075 Eucalyptus grandis
Eucgr.K03308 5.0kb upstream 5.0kb upstream 5000 false Chr11: 41445278-41450277 Eucalyptus grandis
Eucgr.K03308 5.0kb downstream 5.0kb downstream 8798 true Chr11: 41450278-41459075 Eucalyptus grandis
Eucgr.K03308 5.0kb downstream 5.0kb downstream 5000 false Chr11: 41454076-41459075 Eucalyptus grandis
Eucgr.K03308 10.0kb upstream 10.0kb upstream 13798 true Chr11: 41440278-41454075 Eucalyptus grandis
Eucgr.K03308 10.0kb upstream 10.0kb upstream 10000 false Chr11: 41440278-41450277 Eucalyptus grandis
Eucgr.K03308 10.0kb downstream 10.0kb downstream 13798 true Chr11: 41450278-41464075 Eucalyptus grandis
Eucgr.K03308 10.0kb downstream 10.0kb downstream 10000 false Chr11: 41454076-41464075 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780043 5273 Angiosperm View MSA
124071121 5270 Rosid View MSA
123744877 5271 Pentapetalae View MSA
122771281 5272 Eudicot View MSA
121051677 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.50446 0.0 10.9063    
cufflinks 3.29812 0.0 8.20389    
cufflinks 6.90635 0.0 16.0589    
cufflinks 24.3365 0.0 53.8231    
cufflinks 153.103 0.0 377.594 High High
cufflinks 3.29534 0.0 8.27047    

0 Strain