Gene : Eucgr.K03321 E. grandis v2.0
Defline:  (1 of 2) PTHR11071:SF297 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN Genomic Order:  2771
Name:  ? Eucgr.K03321 Secondary Identifier:  ? PAC:32067140
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03321 0.5kb upstream 0.5kb upstream 8382 true Chr11: 41562819-41571200 Eucalyptus grandis
Eucgr.K03321 0.5kb upstream 0.5kb upstream 500 false Chr11: 41570701-41571200 Eucalyptus grandis
Eucgr.K03321 0.5kb downstream 0.5kb downstream 8382 true Chr11: 41562319-41570700 Eucalyptus grandis
Eucgr.K03321 0.5kb downstream 0.5kb downstream 500 false Chr11: 41562319-41562818 Eucalyptus grandis
Eucgr.K03321 1.0kb upstream 1.0kb upstream 8882 true Chr11: 41562819-41571700 Eucalyptus grandis
Eucgr.K03321 1.0kb upstream 1.0kb upstream 1000 false Chr11: 41570701-41571700 Eucalyptus grandis
Eucgr.K03321 1.0kb downstream 1.0kb downstream 8882 true Chr11: 41561819-41570700 Eucalyptus grandis
Eucgr.K03321 1.0kb downstream 1.0kb downstream 1000 false Chr11: 41561819-41562818 Eucalyptus grandis
Eucgr.K03321 2.0kb upstream 2.0kb upstream 9882 true Chr11: 41562819-41572700 Eucalyptus grandis
Eucgr.K03321 2.0kb upstream 2.0kb upstream 2000 false Chr11: 41570701-41572700 Eucalyptus grandis
Eucgr.K03321 2.0kb downstream 2.0kb downstream 9882 true Chr11: 41560819-41570700 Eucalyptus grandis
Eucgr.K03321 2.0kb downstream 2.0kb downstream 2000 false Chr11: 41560819-41562818 Eucalyptus grandis
Eucgr.K03321 5.0kb upstream 5.0kb upstream 12882 true Chr11: 41562819-41575700 Eucalyptus grandis
Eucgr.K03321 5.0kb upstream 5.0kb upstream 5000 false Chr11: 41570701-41575700 Eucalyptus grandis
Eucgr.K03321 5.0kb downstream 5.0kb downstream 12882 true Chr11: 41557819-41570700 Eucalyptus grandis
Eucgr.K03321 5.0kb downstream 5.0kb downstream 5000 false Chr11: 41557819-41562818 Eucalyptus grandis
Eucgr.K03321 10.0kb upstream 10.0kb upstream 17882 true Chr11: 41562819-41580700 Eucalyptus grandis
Eucgr.K03321 10.0kb upstream 10.0kb upstream 10000 false Chr11: 41570701-41580700 Eucalyptus grandis
Eucgr.K03321 10.0kb downstream 10.0kb downstream 17882 true Chr11: 41552819-41570700 Eucalyptus grandis
Eucgr.K03321 10.0kb downstream 10.0kb downstream 10000 false Chr11: 41552819-41562818 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040927 5273 Angiosperm View MSA
124068676 5270 Rosid View MSA
123740533 5271 Pentapetalae View MSA
122793652 5272 Eudicot View MSA
123428973 5275 Viridiplantae View MSA
121347265 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.40831 0.0 10.3535    
cufflinks 3.23026 0.0 7.78925    
cufflinks 5.09612 0.0 11.7972    
cufflinks 2.38643 0.0 5.91371   Low
cufflinks 2.34919 0.0 5.84525   Low
cufflinks 6.15581 0.0 14.1058   High

0 Strain